User profiles for Genevieve L Stein-O’Brien

Genevieve Stein-O'Brien

Assistant Professor, Department of Neuroscience, Johns Hopkins University
Verified email at jhmi.edu
Cited by 2095

[HTML][HTML] Psychedelics reopen the social reward learning critical period

…, N Wright, C Lama, S Faltin, LA Goff, GL Stein-O'Brien… - Nature, 2023 - nature.com
Psychedelics are a broad class of drugs defined by their ability to induce an altered state of
consciousness 1 , 2 . These drugs have been used for millennia in both spiritual and …

[PDF][PDF] Single-cell RNA-seq analysis of retinal development identifies NFI factors as regulating mitotic exit and late-born cell specification

BS Clark, GL Stein-O'Brien, F Shiau, GH Cannon… - Neuron, 2019 - cell.com
Precise temporal control of gene expression in neuronal progenitors is necessary for correct
regulation of neurogenesis and cell fate specification. However, the cellular heterogeneity …

[HTML][HTML] Enter the matrix: factorization uncovers knowledge from omics

GL Stein-O'Brien, R Arora, AC Culhane, AV Favorov… - Trends in Genetics, 2018 - cell.com
Omics data contain signals from the molecular, physical, and kinetic inter- and intracellular
interactions that control biological systems. Matrix factorization (MF) techniques can reveal …

[PDF][PDF] Single-cell analysis of human retina identifies evolutionarily conserved and species-specific mechanisms controlling development

…, N Tsai, Y Zhuo, S He, J Zhang, GL Stein-O'Brien… - Developmental cell, 2020 - cell.com
The development of single-cell RNA sequencing (scRNA-seq) has allowed high-resolution
analysis of cell-type diversity and transcriptional networks controlling cell-fate specification. …

[PDF][PDF] From bench to bedside: Single-cell analysis for cancer immunotherapy

EF Davis-Marcisak, A Deshpande, GL Stein-O'Brien… - Cancer cell, 2021 - cell.com
Single-cell technologies are emerging as powerful tools for cancer research. These technologies
characterize the molecular state of each cell within a tumor, enabling new exploration …

[PDF][PDF] Decomposing cell identity for transfer learning across cellular measurements, platforms, tissues, and species

GL Stein-O'Brien, BS Clark, T Sherman, C Zibetti, Q Hu… - Cell systems, 2019 - cell.com
Analysis of gene expression in single cells allows for decomposition of cellular states as low-dimensional
latent spaces. However, the interpretation and validation of these spaces …

Epigenetic regulation of gene expression in cancer: techniques, resources and analysis

LT Kagohara, GL Stein-O'Brien, D Kelley… - Briefings in …, 2018 - academic.oup.com
Cancer is a complex disease, driven by aberrant activity in numerous signaling pathways in
even individual malignant cells. Epigenetic changes are critical mediators of these functional …

[PDF][PDF] Parallel social information processing circuits are differentially impacted in autism

EM Lewis, GL Stein-O'Brien, AV Patino, R Nardou… - Neuron, 2020 - cell.com
Parallel processing circuits are thought to dramatically expand the network capabilities of the
nervous system. Magnocellular and parvocellular oxytocin neurons have been proposed to …

Hypoxia tolerance in the Norrin-deficient retina and the chronically hypoxic brain studied at single-cell resolution

JS Heng, A Rattner, GL Stein-O'Brien… - Proceedings of the …, 2019 - National Acad Sciences
The mammalian CNS is capable of tolerating chronic hypoxia, but cell type-specific responses
to this stress have not been systematically characterized. In the Norrin KO (Ndp KO ) …

Converging on a cure: the roads to predictive immunotherapy

GL Stein-O'Brien, DT Le, EM Jaffee, EJ Fertig, N Zaidi - Cancer discovery, 2023 - AACR
Convergence science teams integrating clinical, biological, engineering, and computational
expertise are inventing new forecast systems to monitor and predict evolutionary changes in …