Tumor to normal single-cell mRNA comparisons reveal a pan-neuroblastoma cancer cell

G Kildisiute, WM Kholosy, MD Young, K Roberts… - Science …, 2021 - science.org
Neuroblastoma is a childhood cancer that resembles developmental stages of the neural crest.
It is not established what developmental processes neuroblastoma cancer cells represent…

[PDF][PDF] Pitfalls of applying mouse markers to human adrenal medullary cells

G Kildisiute, MD Young, S Behjati - Cancer Cell, 2021 - cell.com
In this letter, we re-analyze human fetal adrenal data generated by Dong et al. to demonstrate
the pitfalls of relying on mouse marker genes to annotate human data. We show that …

[HTML][HTML] Single cell derived mRNA signals across human kidney tumors

…, K Kwakwa, E Khabirova, G Kildisiute… - Nature …, 2021 - nature.com
Tumor cells may share some patterns of gene expression with their cell of origin, providing
clues into the differentiation state and origin of cancer. Here, we study the differentiation state …

[HTML][HTML] An integrated single-cell analysis of human adrenal cortex development

I Del Valle, MD Young, G Kildisiute, OK Ogunbiyi… - JCI insight, 2023 - ncbi.nlm.nih.gov
The adrenal glands synthesize and release essential steroid hormones such as cortisol and
aldosterone, but many aspects of human adrenal gland development are not well …

[HTML][HTML] Precise identification of cancer cells from allelic imbalances in single cell transcriptomes

MK Trinh, CN Pacyna, G Kildisiute… - Communications …, 2022 - nature.com
A fundamental step of tumour single cell mRNA analysis is separating cancer and non-cancer
cells. We show that the common approach to separation, using shifts in average …

[HTML][HTML] The protein subunit of telomerase displays patterns of dynamic evolution and conservation across different metazoan taxa

…, A Di Donfrancesco, G Kildisiute… - BMC evolutionary …, 2017 - Springer
Background Most animals employ telomerase, which consists of a catalytic subunit known
as the telomerase reverse transcriptase (TERT) and an RNA template, to maintain telomere …

[HTML][HTML] Transcriptional signals of transformation in human cancer

G Kildisiute, M Kalyva, R Elmentaite, S van Dongen… - Genome Medicine, 2024 - Springer
Background As normal cells transform into cancers, their cell state changes, which may
drive cancer cells into a stem-like or more primordial, foetal, or embryonic cell state. The …

A cell atlas of human adrenal cortex development and disease

I del Valle, MD Young, G Kildisiute, OK Ogunbiyi… - bioRxiv, 2022 - biorxiv.org
The adrenal glands synthesize and release essential steroid hormones such as cortisol and
aldosterone, but the mechanisms underlying human adrenal gland development are not …

Normal cell signals in human cancer transcriptomes

G Kildisiute - 2022 - repository.cam.ac.uk
Cancer cells arise from normal cells, and may retain transcriptional patterns present in the
cell of origin. Recent advances in single-cell transcriptomics have allowed us to profile both …

Report–Tumor to normal single cell mRNA comparisons reveal a pan-neuroblastoma cancer cell

G Kildisiute, WM Kholosy, MD Young, K Roberts… - bioRxiv, 2020 - biorxiv.org
Neuroblastoma is an embryonal childhood cancer that arises from aberrant development of
the neural crest, mostly within the fetal adrenal medulla. It is not established what …