User profiles for Giorgio Gonnella
Giorgio GonnellaInstitut Pasteur du Cambodge Verified email at pasteur-kh.org Cited by 1203 |
[HTML][HTML] Readjoiner: a fast and memory efficient string graph-based sequence assembler
G Gonnella, S Kurtz - BMC bioinformatics, 2012 - Springer
Background Ongoing improvements in throughput of the next-generation sequencing
technologies challenge the current generation of de novo sequence assemblers. Most recent …
technologies challenge the current generation of de novo sequence assemblers. Most recent …
Endemic hydrothermal vent species identified in the open ocean seed bank
G Gonnella, S Böhnke, D Indenbirken… - Nature …, 2016 - nature.com
Hydrothermal vent systems host microbial communities among which several microorganisms
have been considered endemic to this type of habitat. It is still unclear how these …
have been considered endemic to this type of habitat. It is still unclear how these …
TDP-43 enhances translation of specific mRNAs linked to neurodegenerative disease
N Neelagandan, G Gonnella, S Dang… - Nucleic acids …, 2019 - academic.oup.com
The RNA-binding protein TDP-43 is heavily implicated in neurodegenerative disease.
Numerous patient mutations in TARDBP, the gene encoding TDP-43, combined with data from …
Numerous patient mutations in TARDBP, the gene encoding TDP-43, combined with data from …
[HTML][HTML] Hydrothermal chimneys host habitat-specific microbial communities: analogues for studying the possible impact of mining seafloor massive sulfide deposits
Y Han, G Gonnella, N Adam, A Schippers… - Scientific reports, 2018 - nature.com
To assess the risk that mining of seafloor massive sulfides (SMS) from extinct hydrothermal
vent environments has for changing the ecosystem irreversibly, we sampled SMS analogous …
vent environments has for changing the ecosystem irreversibly, we sampled SMS analogous …
In situ chemistry and microbial community compositions in five deep‐sea hydrothermal fluid samples from Irina II in the Logatchev field
We present data on the co‐registered geochemistry (in situ mass spectrometry) and microbiology
(pyrosequencing of 16 S rRNA genes; V 1, V 2, V 3 regions) in five fluid samples from I …
(pyrosequencing of 16 S rRNA genes; V 1, V 2, V 3 regions) in five fluid samples from I …
GfaViz: flexible and interactive visualization of GFA sequence graphs
G Gonnella, N Niehus, S Kurtz - Bioinformatics, 2019 - academic.oup.com
… The authors wish it to be known that, in their opinion, Giorgio Gonnella and Niklas Niehus
… The authors wish it to be known that, in their opinion, Giorgio Gonnella and Niklas Niehus …
… The authors wish it to be known that, in their opinion, Giorgio Gonnella and Niklas Niehus …
[HTML][HTML] TextFormats: Simplifying the definition and parsing of text formats in bioinformatics
G Gonnella - Plos one, 2022 - journals.plos.org
Text formats are common in bioinformatics, as they allow for editing and filtering using
standard tools, as well as, since text formats are often human readable, manual inspection and …
standard tools, as well as, since text formats are often human readable, manual inspection and …
Handling temperature bursts reaching 464 C: different microbial strategies in the Sisters Peak hydrothermal chimney
The active venting Sisters Peak (SP) chimney on the Mid-Atlantic Ridge holds the current
temperature record for the hottest ever measured hydrothermal fluids (400C, accompanied by …
temperature record for the hottest ever measured hydrothermal fluids (400C, accompanied by …
Microbial community compositions and geochemistry of sediments with increasing distance to the hydrothermal vent outlet in the Kairei field
…, C Kriete, D Garbe-Schönberg, G Gonnella… - Geomicrobiology …, 2020 - Taylor & Francis
Microbial metabolisms in sediments play a pivotal role in marine element cycling. In
hydrothermal sediments chemosynthetic microorganisms likely prevail, while in non-hydrothermally …
hydrothermal sediments chemosynthetic microorganisms likely prevail, while in non-hydrothermally …
[HTML][HTML] Parameters governing the community structure and element turnover in Kermadec volcanic ash and hydrothermal fluids as monitored by inorganic electron …
The microbial community composition and its functionality was assessed for hydrothermal
fluids and volcanic ash sediments from Haungaroa and hydrothermal fluids from the Brothers …
fluids and volcanic ash sediments from Haungaroa and hydrothermal fluids from the Brothers …