User profiles for Giovanni Parmigiani

Giovanni Parmigiani

Professor Department of Data Science, DFCI
Verified email at dfci.harvard.edu
Cited by 62678

An integrated genomic analysis of human glioblastoma multiforme

…, DD Bigner, R Karchin, N Papadopoulos, G Parmigiani… - science, 2008 - science.org
Glioblastoma multiforme (GBM) is the most common and lethal type of brain cancer. To identify
the genetic alterations in GBMs, we sequenced 20,661 protein coding genes, determined …

[HTML][HTML] Meta-analysis of BRCA1 and BRCA2 penetrance

S Chen, G Parmigiani - Journal of clinical oncology: official journal …, 2007 - ncbi.nlm.nih.gov
Purpose Genetic counseling is now routinely offered to individuals at high risk of carrying a
BRCA1 or BRCA2 mutation. Risk prediction provided by the counselor requires reliable …

Model averaged double robust estimation

M Cefalu, F Dominici, N Arvold, G Parmigiani - Biometrics, 2017 - academic.oup.com
Researchers estimating causal effects are increasingly challenged with decisions on how to
best control for a potentially high-dimensional set of confounders. Typically, a single …

Use R!

RGKHG Parmigiani - 2009 - Springer
This book is intended to provide fundamental statistical concepts and tools relevant to the
analysis of genetic data arising from population-based association studies. Elementary …

Core signaling pathways in human pancreatic cancers revealed by global genomic analyses

…, R Karchin, N Papadopoulos, G Parmigiani… - science, 2008 - science.org
There are currently few therapeutic options for patients with pancreatic cancer, and new
insights into the pathogenesis of this lethal disease are urgently needed. Toward this end, we …

The consensus coding sequences of human breast and colorectal cancers

…, AF Gazdar, J Hartigan, L Wu, C Liu, G Parmigiani… - science, 2006 - science.org
The elucidation of the human genome sequence has made it possible to identify genetic
alterations in cancers in unprecedented detail. To begin a systematic analysis of such …

The genomic landscapes of human breast and colorectal cancers

…, P Buckhaults, SD Markowitz, G Parmigiani… - Science, 2007 - science.org
Human cancer is caused by the accumulation of mutations in oncogenes and tumor suppressor
genes. To catalog the genetic changes that occur during tumorigenesis, we isolated …

The clinical significance of positive blood cultures in the 1990s: a prospective comprehensive evaluation of the microbiology, epidemiology, and outcome of …

…, S Mirrett, LG Reimer, G Parmigiani… - Clinical Infectious …, 1997 - academic.oup.com
To assess changes since the mid-1970s, we reviewed 843 episodes of positive blood cultures
in 707 patients with septicemia. The five most common pathogens were Staphylococcus …

Comparative lesion sequencing provides insights into tumor evolution

S Jones, W Chen, G Parmigiani… - Proceedings of the …, 2008 - National Acad Sciences
We show that the times separating the birth of benign, invasive, and metastatic tumor cells
can be determined by analysis of the mutations they have in common. When combined with …

[HTML][HTML] Heterogeneity of genomic evolution and mutational profiles in multiple myeloma

…, M Fulciniti, PG Richardson, G Parmigiani… - Nature …, 2014 - nature.com
Multiple myeloma is an incurable plasma cell malignancy with a complex and incompletely
understood molecular pathogenesis. Here we use whole-exome sequencing, copy-number …