High-throughput data production technologies, particularly ‘next-generation’ DNA sequencing,
have ushered in widespread and disruptive changes to biomedical research. Making …

Here, we describe a tool suite that functions on all of the commonly known FASTQ format
variants and provides a pipeline for manipulating next generation sequencing data taken from …

High‐throughput data production has revolutionized molecular biology. However, massive
increases in data generation capacity require analysis approaches that are more …

The proliferation of web-based integrative analysis frameworks has enabled users to perform
complex analyses directly through the web. Unfortunately, it also revoked the freedom to …

Recent technological advances have lead to the ability to generate large amounts of data for
model and non-model organisms. Whereas, in the past, there have been a relatively small …

Plant genome-scale resources are being generated at an increasing rate as sequencing
technologies continue to improve and raw data costs continue to fall; however, the cost of …

Background The interaction between biological researchers and the bioinformatics tools
they use is still hampered by incomplete interoperability between such tools. To ensure …

Modern life sciences are becoming increasingly data intensive, posing a significant
challenge for most researchers and shifting the bottleneck of scientific discovery from data …

… Kitchen 1 , Greg Von Kuster 2 , Webb Miller 1,3 , Iliana B. Baums1 …

Galaxy ( https://galaxyproject.org ) is a web-based computational workbench used by tens
of thousands of scientists across the world to analyze large biomedical datasets. Since 2005, …