User profiles for Guilhem Sommeria-Klein

Guilhem Sommeria-Klein

University of Turku
Verified email at utu.fi
Cited by 302

Global drivers of eukaryotic plankton biogeography in the sunlit ocean

G Sommeria-Klein, R Watteaux, FM Ibarbalz… - Science, 2021 - science.org
Eukaryotic plankton are a core component of marine ecosystems with exceptional taxonomic
and ecological diversity, yet how their ecology interacts with the environment to drive global …

Extracellular DNA extraction is a fast, cheap and reliable alternative for multi-taxa surveys based on soil DNA

…, V Schilling, H Schimann, G Sommeria-Klein… - Soil Biology and …, 2016 - Elsevier
DNA metabarcoding on soil samples is increasingly used for large-scale and multi-taxa
biodiversity studies. However, DNA extraction may be a major bottleneck for such wide uses. It …

Large‐scale DNA‐based survey of frogs in Amazonia suggests a vast underestimation of species richness and endemism

…, J Chave, FG Ficetola, G SommeriaKlein… - Journal of …, 2020 - Wiley Online Library
Aim Mapping Amazonian biodiversity accurately is a major challenge for integrated conservation
strategies and to study its origins. However, species boundaries and their respective …

Modelling spatial patterns in host‐associated microbial communities

MO Ruuskanen, G SommeriaKlein… - Environmental …, 2021 - Wiley Online Library
Microbial communities exhibit spatial structure at different scales, due to constant interactions
with their environment and dispersal limitation. While this spatial structure is often …

[HTML][HTML] Inferring neutral biodiversity parameters using environmental DNA data sets

G Sommeria-Klein, L Zinger, P Taberlet, E Coissac… - Scientific Reports, 2016 - nature.com
The DNA present in the environment is a unique and increasingly exploited source of
information for conducting fast and standardized biodiversity assessments for any type of …

Latent Dirichlet Allocation reveals spatial and taxonomic structure in a DNA‐based census of soil biodiversity from a tropical forest

G SommeriaKlein, L Zinger, E Coissac… - Molecular ecology …, 2020 - Wiley Online Library
High‐throughput sequencing of amplicons from environmental DNA samples permits rapid,
standardized and comprehensive biodiversity assessments. However, retrieving and …

[HTML][HTML] Quantifying the impact of ecological memory on the dynamics of interacting communities

M Khalighi, G Sommeria-Klein, D Gonze… - PLoS computational …, 2022 - journals.plos.org
Ecological memory refers to the influence of past events on the response of an ecosystem to
exogenous or endogenous changes. Memory has been widely recognized as a key …

Phylogenetic comparative approach reveals evolutionary conservatism, ancestral composition, and integration of vertebrate gut microbiota

B Perez-Lamarque, G Sommeria-Klein… - Molecular Biology …, 2023 - academic.oup.com
How host-associated microbial communities evolve as their hosts diversify remains equivocal:
how conserved is their composition? What was the composition of ancestral microbiota? …

From models to data: understanding biodiversity patterns from environmental DNA data

G Sommeria-Klein - 2017 - theses.hal.science
Integrative patterns of biodiversity, such as the distribution of taxa abundances and the spatial
turnover of taxonomic composition, have been under scrutiny from ecologists for a long …

Global drivers of eukaryotic plankton biogeography in the sunlit ocean

SK Guilhem, W Romain, I Daniele, B Chris, M Hélène - bioRxiv, 2020 - biorxiv.org
Eukaryotic plankton are a core component of marine ecosystems with exceptional taxonomic
and ecological diversity. Yet how their ecology interacts with the environment to drive …