User profiles for Håkon Tjeldnes

Håkon Tjeldnes

PhD researcher, University of Bergen
Verified email at uib.no
Cited by 1336

CHOPCHOP v3: expanding the CRISPR web toolbox beyond genome editing

…, M Krause, YN Torres Cleuren, H Tjeldnes… - Nucleic acids …, 2019 - academic.oup.com
The CRISPR–Cas system is a powerful genome editing tool that functions in a diverse array
of organisms and cell types. The technology was initially developed to induce targeted …

[PDF][PDF] Profiling of small ribosomal subunits reveals modes and regulation of translation initiation

A Giess, YNT Cleuren, H Tjeldnes, M Krause… - Cell reports, 2020 - cell.com
Translation initiation is often attributed as the rate-determining step of eukaryotic protein
synthesis and key to gene expression control. Despite this centrality, the series of steps involved …

[HTML][HTML] Small open reading frames, how to find them and determine their function

PM Kute, O Soukarieh, H Tjeldnes, DA Trégouët… - Frontiers in …, 2022 - frontiersin.org
Advances in genomics and molecular biology have revealed an abundance of small open
reading frames (sORFs) across all types of transcripts. While these sORFs are often assumed …

[HTML][HTML] ORFik: a comprehensive R toolkit for the analysis of translation

H Tjeldnes, K Labun, Y Torres Cleuren, K Chyżyńska… - BMC …, 2021 - Springer
Background With the rapid growth in the use of high-throughput methods for characterizing
translation and the continued expansion of multi-omics, there is a need for back-end …

[HTML][HTML] Ribosome Decision Graphs for the Representation of Eukaryotic RNA Translation Complexity

JAS Tierney, M Świrski, H Tjeldnes, JM Mudge, J Kufel… - bioRxiv, 2023 - ncbi.nlm.nih.gov
The application of ribosome profiling has revealed an unexpected abundance of translation
in addition to that responsible for the synthesis of previously annotated protein-coding …

[HTML][HTML] Gene Expression Analysis in gla-Mutant Zebrafish Reveals Enhanced Ca2+ Signaling Similar to Fabry Disease

HOA Elsaid, H Tjeldnes, M Rivedal, C Serre… - International Journal of …, 2022 - mdpi.com
Fabry disease (FD) is an X-linked inborn metabolic disorder due to partial or complete
lysosomal α-galactosidase A deficiency. FD is characterized by progressive renal insufficiency …

An Atlas of the Human uORFome and its Regulation across Tissues

H Tjeldnes - 2018 - bora.uib.no
Upstream open reading frames (uORFs) are in frame start and stop codons starting in the 5’
leader of mRNAs. They have been found to regulate gene expression, primarily through …

Deconstructing the individual steps of vertebrate translation initiation

A Giess, YN Torres Cleuren, H Tjeldnes, M Krause… - bioRxiv, 2019 - biorxiv.org
Translation initiation is often attributed as the rate determining step of eukaryotic protein
synthesis and key to gene expression control 1 . Despite this centrality the series of steps …

Comparison of RNA-folding structures, in-vivo, in-vitro and in-silico

H Roodashty - 2019 - bora.uib.no
… I am also to my co-supervisor Håkon Tjeldnes for invaluable technical and hands-on …
September 2019 with Professor Eivind Valen as supervisor and Håkon Tjeldnes as co-supervisor. …

Towards stratification of patients with Sjögren's syndrome: Single cell analyses and immune profiling

I Sarkar - 2020 - bora.uib.no
… Thank you, Dimitris Kleftogiannis and Pattama Wapeesittipan, for your scientific input and
friendship, Hakon Tjeldnes and David Dolan for guiding me through my baby steps in R and …