A single-chain and fast-responding light-inducible Cre recombinase as a novel optogenetic switch

H Duplus-Bottin, M Spichty, G Triqueneaux, C Place… - Elife, 2021 - elifesciences.org
Optogenetics enables genome manipulations with high spatiotemporal resolution, opening
exciting possibilities for fundamental and applied biological research. Here, we report the …

Genomics of cellular proliferation in periodic environmental fluctuations

…, M Richard, E Fulcrand, H DuplusBottin… - Molecular Systems …, 2018 - embopress.org
Living systems control cell growth dynamically by processing information from their environment.
Although responses to a single environmental change have been intensively studied, …

[HTML][HTML] Exploiting single-cell quantitative data to map genetic variants having probabilistic effects

…, M Richard, D Jost, C Burny, H Duplus-Bottin… - PLoS …, 2016 - journals.plos.org
Despite the recent progress in sequencing technologies, genome-wide association studies (GWAS)
remain limited by a statistical-power issue: many polymorphisms contribute little to …

A monogenic and fast-responding Light-Inducible Cre recombinase as a novel optogenetic switch

H Duplus-Bottin, M Spichty, G Triqueneaux, C Place… - bioRxiv, 2020 - biorxiv.org
Optogenetics enables genome manipulations with high spatiotemporal resolution, opening
exciting possibilities for fundamental and applied biological research. Here, we report the …

Assigning function to natural allelic variation via dynamic modeling of gene network induction

M Richard, F Chuffart, H DuplusBottin… - Molecular Systems …, 2018 - embopress.org
More and more natural DNA variants are being linked to physiological traits. Yet, understanding
what differences they make on molecular regulations remains challenging. Important …

Genomics of cellular proliferation under periodic stress

J Salignon, M Richard, E Fulcrand, G Yvert - bioRxiv, 2017 - biorxiv.org
… , Hélène Duplus-Bottin for technical help on strains constructions, David Stillman for plasmids,
Sandrine Mouradian and SFR Biosciences Gerland-Lyon Sud (UMS3444/US8) for access …

Meeting report on experimental approaches to evolution and ecology using Yeast and other model systems

DF Jarosz, AM Dudley - 2017 - academic.oup.com
Helen Murphy (College of William and Mary) presented a system to study the evolution of
biofilm formation and plastic adherence. In addition to developing a simple method (…

[HTML][HTML] The promise of optogenetics for bioproduction: dynamic control strategies and scale-up instruments

S Pouzet, A Banderas, M Le Bec, T Lautier, G Truan… - Bioengineering, 2020 - mdpi.com
Progress in metabolic engineering and synthetic and systems biology has made bioproduction
an increasingly attractive and competitive strategy for synthesizing biomolecules, …

Genomics of fitness in periodic stress

J Salignon - 2017 - theses.hal.science
Organisms live in dynamic environments. However, most experimental approaches study the
function and selection of genes in steady environments. Therefore, natural selection acting …

Structure of a light-activated LOV protein dimer that regulates transcription

AT Vaidya, CH Chen, JC Dunlap, JJ Loros… - Science …, 2011 - science.org
Light, oxygen, or voltage (LOV) protein domains are present in many signaling proteins in
bacteria, archaea, protists, plants, and fungi. The LOV protein VIVID (VVD) of the filamentous …