[HTML][HTML] A large-scale genomic snapshot of Klebsiella spp. isolates in Northern Italy reveals limited transmission between clinical and non-clinical settings
The Klebsiella group, found in humans, livestock, plants, soil, water and wild animals, is
genetically and ecologically diverse. Many species are opportunistic pathogens and can …
genetically and ecologically diverse. Many species are opportunistic pathogens and can …
PIRATE: A fast and scalable pangenomics toolbox for clustering diverged orthologues in bacteria
… Harry A Thorpe , Harry A Thorpe … Sion C Bayliss, Harry A Thorpe, Nicola M Coyle, Samuel
K Sheppard, Edward J Feil, PIRATE: A fast and scalable pangenomics toolbox for clustering …
K Sheppard, Edward J Feil, PIRATE: A fast and scalable pangenomics toolbox for clustering …
[HTML][HTML] Evolutionary Trade-Offs Underlie the Multi-faceted Virulence of Staphylococcus aureus
Bacterial virulence is a multifaceted trait where the interactions between pathogen and host
factors affect the severity and outcome of the infection. Toxin secretion is central to the …
factors affect the severity and outcome of the infection. Toxin secretion is central to the …
The stealthy superbug: the role of asymptomatic enteric carriage in maintaining a long-term hospital outbreak of ST228 methicillin-resistant Staphylococcus aureus
… In contrast, our tertiary care hospital experienced a 4-year outbreak between 2008 and
2012 that affected over 1,600 patients and was due to the HA-MRSA sequence type 228 (ST228) …
2012 that affected over 1,600 patients and was due to the HA-MRSA sequence type 228 (ST228) …
[HTML][HTML] Strong pathogen competition in neonatal gut colonisation
Opportunistic bacterial pathogen species and their strains that colonise the human gut are
generally understood to compete against both each other and the commensal species …
generally understood to compete against both each other and the commensal species …
Comparative analyses of selection operating on nontranslated intergenic regions of diverse bacterial species
… Harry A Thorpe , Harry A Thorpe … All of the code used in the analysis is available at
https://github.com/harry-thorpe/Intergenic_selection_paper under the GPLv3 license. The complete …
https://github.com/harry-thorpe/Intergenic_selection_paper under the GPLv3 license. The complete …
Piggy: a rapid, large-scale pan-genome analysis tool for intergenic regions in bacteria
… Harry A Thorpe , Harry A Thorpe … Harry A Thorpe, Sion C Bayliss, Samuel K Sheppard,
Edward J Feil, Piggy: a rapid, large-scale pan-genome analysis tool for intergenic regions in …
Edward J Feil, Piggy: a rapid, large-scale pan-genome analysis tool for intergenic regions in …
[HTML][HTML] Description of Klebsiella spallanzanii sp. nov. and of Klebsiella pasteurii sp. nov.
…, V Passet, M Corbella, HA Thorpe… - Frontiers in …, 2019 - frontiersin.org
Klebsiella oxytoca causes opportunistic human infections and post-antibiotic haemorrhagic
diarrhea. This Enterobacteriaceae species is genetically heterogeneous and is currently …
diarrhea. This Enterobacteriaceae species is genetically heterogeneous and is currently …
[HTML][HTML] Adolescent substance use and the brain: Behavioral, cognitive and neuroimaging correlates
Adolescence is an important ontogenetic period that is characterized by behaviors such as
enhanced novelty-seeking, impulsivity, and reward preference, which can give rise to an …
enhanced novelty-seeking, impulsivity, and reward preference, which can give rise to an …
[HTML][HTML] Whole genome sequencing and phylogenetic analysis of strains of the agent of Lyme disease Borrelia burgdorferi from Canadian emergence zones
…, G Margos, S Mechai, G Van Domselaar, HA Thorpe… - Scientific Reports, 2018 - nature.com
Lyme disease is emerging in southern Canada due to range expansion of the tick vector,
followed by invasion of the agent of Lyme disease Borrelia burgdorferi sensu stricto. Strain …
followed by invasion of the agent of Lyme disease Borrelia burgdorferi sensu stricto. Strain …