[HTML][HTML] Accurate whole human genome sequencing using reversible terminator chemistry
DR Bentley, S Balasubramanian, HP Swerdlow… - nature, 2008 - nature.com
DNA sequence information underpins genetic research, enabling discoveries of important
biological or medical benefit. Sequencing projects have traditionally used long (400–800 …
biological or medical benefit. Sequencing projects have traditionally used long (400–800 …
[HTML][HTML] A tale of three next generation sequencing platforms: comparison of Ion Torrent, Pacific Biosciences and Illumina MiSeq sequencers
Background Next generation sequencing (NGS) technology has revolutionized genomic and
genetic research. The pace of change in this area is rapid with three major new sequencing …
genetic research. The pace of change in this area is rapid with three major new sequencing …
G&T-seq: parallel sequencing of single-cell genomes and transcriptomes
…, R Banerjee, PD Ellis, MA Quail, HP Swerdlow… - Nature …, 2015 - nature.com
The simultaneous sequencing of a single cell's genome and transcriptome offers a powerful
means to dissect genetic variation and its effect on gene expression. Here we describe G&T-…
means to dissect genetic variation and its effect on gene expression. Here we describe G&T-…
Demographic history and rare allele sharing among human populations
…, T Skelly, J Stalker, HP Swerdlow… - Proceedings of the …, 2011 - National Acad Sciences
High-throughput sequencing technology enables population-level surveys of human genomic
variation. Here, we examine the joint allele frequency distributions across continental …
variation. Here, we examine the joint allele frequency distributions across continental …
[HTML][HTML] Single-cell RNA-seq of rheumatoid arthritis synovial tissue using low-cost microfluidic instrumentation
…, DE Orange, RB Darnell, HP Swerdlow… - Nature …, 2018 - nature.com
Droplet-based single-cell RNA-seq has emerged as a powerful technique for massively parallel
cellular profiling. While this approach offers the exciting promise to deconvolute cellular …
cellular profiling. While this approach offers the exciting promise to deconvolute cellular …
[HTML][HTML] Optimizing Illumina next-generation sequencing library preparation for extremely AT-biased genomes
…, DJ Turner, B MacInnis, DP Kwiatkowski, HP Swerdlow… - BMC genomics, 2012 - Springer
Background Massively parallel sequencing technology is revolutionizing approaches to
genomic and genetic research. Since its advent, the scale and efficiency of Next-Generation …
genomic and genetic research. Since its advent, the scale and efficiency of Next-Generation …
Optimal enzymes for amplifying sequencing libraries
…, SR Harris, TF Skelly, JA McQuillan, HP Swerdlow… - Nature …, 2012 - nature.com
PCR amplification introduces bias into Illumina sequencing libraries 1. Although amplification-free
library preparation solves this, micrograms of starting material are usually required. …
library preparation solves this, micrograms of starting material are usually required. …
Efficient depletion of host DNA contamination in malaria clinical sequencing
…, DP Kwiatkowski, HP Swerdlow… - Journal of clinical …, 2013 - Am Soc Microbiol
The cost of whole-genome sequencing (WGS) is decreasing rapidly as next-generation
sequencing technology continues to advance, and the prospect of making WGS available for …
sequencing technology continues to advance, and the prospect of making WGS available for …
[HTML][HTML] SASI-Seq: sample assurance Spike-Ins, and highly differentiating 384 barcoding for Illumina sequencing
…, D Jackson, S Leonard, T Skelly, HP Swerdlow… - BMC genomics, 2014 - Springer
Background A minor but significant fraction of samples subjected to next-generation sequencing
methods are either mixed-up or cross-contaminated. These events can lead to false or …
methods are either mixed-up or cross-contaminated. These events can lead to false or …
Low-cost, high-sensitivity laser-induced fluorescence detection for DNA sequencing by capillary gel electrophoresis
DY Chen, HP Swerdlow, HR Harke, JZ Zhang… - … of Chromatography A, 1991 - Elsevier
… Swerdlow and Gesteland [20] described DNA sequence analysis by use of capillary
polyacrylamide … Swerdlow and R. Gesteland, … Swerdlow, S. Wu, H. Harke and NJ Dovichi, J. …
polyacrylamide … Swerdlow and R. Gesteland, … Swerdlow, S. Wu, H. Harke and NJ Dovichi, J. …