User profiles for H. Koohy
Hashem KoohyOxford University Verified email at rdm.ox.ac.uk Cited by 2572 |
[HTML][HTML] Can we predict T cell specificity with digital biology and machine learning?
Recent advances in machine learning and experimental biology have offered breakthrough
solutions to problems such as protein structure prediction that were long thought to be …
solutions to problems such as protein structure prediction that were long thought to be …
Colonic epithelial cell diversity in health and inflammatory bowel disease
The colonic epithelium facilitates host–microorganism interactions to control mucosal
immunity, coordinate nutrient recycling and form a mucus barrier. Breakdown of the epithelial …
immunity, coordinate nutrient recycling and form a mucus barrier. Breakdown of the epithelial …
[PDF][PDF] Structural remodeling of the human colonic mesenchyme in inflammatory bowel disease
Intestinal mesenchymal cells play essential roles in epithelial homeostasis, matrix
remodeling, immunity, and inflammation. But the extent of heterogeneity within the colonic …
remodeling, immunity, and inflammation. But the extent of heterogeneity within the colonic …
[HTML][HTML] Predicting cross-reactivity and antigen specificity of T cell receptors
Adaptive immune recognition is mediated by specific interactions between heterodimeric T
cell receptors (TCRs) and their cognate peptide-MHC (pMHC) ligands, and the methods to …
cell receptors (TCRs) and their cognate peptide-MHC (pMHC) ligands, and the methods to …
[PDF][PDF] Spatiotemporal analysis of human intestinal development at single-cell resolution
Development of the human intestine is not well understood. Here, we link single-cell RNA
sequencing and spatial transcriptomics to characterize intestinal morphogenesis through time. …
sequencing and spatial transcriptomics to characterize intestinal morphogenesis through time. …
Single-cell atlas of colonic CD8+ T cells in ulcerative colitis
… h, Upset plot showing TCR clones shared between different clusters, each shared clone
visualized as an ‘interaction’ and indicated by a black circle joined by black lines. Each unique …
visualized as an ‘interaction’ and indicated by a black circle joined by black lines. Each unique …
[PDF][PDF] Weakly prime modules
M Behboodi, H Koohy - Vietnam J. Math, 2004 - math.ac.vn
A left R-module M is called weakly prime module if the annihilator of any nonzero submodule
of M is a prime ideal and a proper submodule P of M is called weakly prime submodule if …
of M is a prime ideal and a proper submodule P of M is called weakly prime submodule if …
[HTML][HTML] In silico identification of vaccine targets for 2019-nCoV
Background: The newly identified coronavirus known as 2019-nCoV has posed a serious
global health threat. According to the latest report (18-February-2020), it has infected more …
global health threat. According to the latest report (18-February-2020), it has infected more …
[HTML][HTML] Potential CD8+ T cell cross-reactivity against SARS-CoV-2 conferred by other coronavirus strains
While individuals infected with coronavirus disease 2019 (COVID-19) manifested a broad
range in susceptibility and severity to the disease, the pre-existing immune memory to related …
range in susceptibility and severity to the disease, the pre-existing immune memory to related …
[HTML][HTML] A comparison of peak callers used for DNase-Seq data
Genome-wide profiling of open chromatin regions using DNase I and high-throughput
sequencing (DNase-seq) is an increasingly popular approach for finding and studying regulatory …
sequencing (DNase-seq) is an increasingly popular approach for finding and studying regulatory …