TopDom: an efficient and deterministic method for identifying topological domains in genomes

H Shin, Y Shi, C Dai, H Tjong, K Gong… - Nucleic acids …, 2016 - academic.oup.com
Genome-wide proximity ligation assays allow the identification of chromatin contacts at
unprecedented resolution. Several studies reveal that mammalian chromosomes are composed …

Producing genome structure populations with the dynamic and automated PGS software

N Hua, H Tjong, H Shin, K Gong, XJ Zhou, F Alber - Nature protocols, 2018 - nature.com
Chromosome conformation capture technologies such as Hi-C are widely used to investigate
the spatial organization of genomes. Because genome structures can vary considerably …

[HTML][HTML] Potent antibody lineage against malaria transmission elicited by human vaccination with Pfs25

…, SW Scally, A Bosch, N Nguyen, H Shin… - Nature …, 2019 - nature.com
Transmission-blocking vaccines have the potential to be key contributors to malaria
elimination. Such vaccines elicit antibodies that inhibit parasites during their development in …

Electrodiagnosis support system for localizing neural injury in an upper limb

H Shin, KH Kim, C Song, I Lee, K Lee… - Journal of the …, 2010 - academic.oup.com
Needle electromyography (EMG) is used for the diagnosis of a neural injury in patients with
a cervical/lumbar radiculopathy, plexopathy, peripheral neuropathy, or myopathy. Needle …

Online removal of ocular artifacts from single channel EEG for ubiquitous healthcare applications

H Shin, H Kim, S Lee, J Kang - Proceedings of the 4th …, 2009 - ieeexplore.ieee.org
A large number of ubiquitous healthcare systems and applications have been introduced
recently as a result of breakthroughs in technologies such as wireless sensors and BAN (body …

A cube framework for incorporating inter-gene information into biological data mining

K Lin, J Kang, H Shin, J Lee - International journal of data …, 2009 - inderscienceonline.com
Large volumes of microarray data are registered daily in public repositories such as SMD (Belkin
and Niyogi, 2003) and GEO (Ashburner et al., 2000). Such repositories have quickly …

Extracting signals from noisy single-channel EEG stream for ubiquitous healthcare applications

H Shin, S Lee, H Kim, J Kang, K Lee - Journal of Internet Technology, 2012 - jit.ndhu.edu.tw
A large number of ubiquitous healthcare systems and applications have been recently
introduced as a result of breakthroughs in technologies such as wireless sensors and BAN (Body …

PGS: a dynamic and automated population-based genome structure software

N Hua, H Tjong, H Shin, K Gong, XJ Zhou, F Alber - bioRxiv, 2017 - biorxiv.org
Hi-C technologies are widely used to investigate the spatial organization of genomes.
However, the structural variability of the genome is a great challenge to interpreting ensemble-…

Understanding the 3D Genome Organization in Topological Domain Level

H Shin - 2017 - search.proquest.com
Genome-wide proximity ligation assays, such as Hi-C or TCC (ie Genome wide chromatin
conformation capture), allow the identification of chromatin contacts at unprecedented …

SureSelect sequencing panels and algorithms to detect copy number variations (CNVs), DNA rearrangements, microsatellite Instability and tumor mutational burden …

A Vadapalli, A Khare, H Shin, A Ashutosh, L Forsmark… - Cancer Research, 2020 - AACR
Background: The current standard of genomic profiling of cancer tissues relies upon multiple
separate technologies to aid in tumor characterization. Here we describe an NGS panel …