User profiles for Heather J. Lee
Heather J LeeThe University of Newcastle Verified email at newcastle.edu.au Cited by 6407 |
Single-cell genome-wide bisulfite sequencing for assessing epigenetic heterogeneity
We report a single-cell bisulfite sequencing (scBS-seq) method that can be used to accurately
measure DNA methylation at up to 48.4% of CpG sites. Embryonic stem cells grown in …
measure DNA methylation at up to 48.4% of CpG sites. Embryonic stem cells grown in …
Parallel single-cell sequencing links transcriptional and epigenetic heterogeneity
We report scM&T-seq, a method for parallel single-cell genome-wide methylome and
transcriptome sequencing that allows for the discovery of associations between transcriptional and …
transcriptome sequencing that allows for the discovery of associations between transcriptional and …
Osteoclast differentiation factor RANKL controls development of progestin-driven mammary cancer
Breast cancer is one of the most common cancers in humans and will on average affect up
to one in eight women in their lifetime in the United States and Europe 1 . The Women’s …
to one in eight women in their lifetime in the United States and Europe 1 . The Women’s …
[HTML][HTML] scNMT-seq enables joint profiling of chromatin accessibility DNA methylation and transcription in single cells
…, CA Kapourani, TM Stubbs, HJ Lee… - Nature …, 2018 - nature.com
Parallel single-cell sequencing protocols represent powerful methods for investigating regulatory
relationships, including epigenome-transcriptome interactions. Here, we report a single…
relationships, including epigenome-transcriptome interactions. Here, we report a single…
[HTML][HTML] DeepCpG: accurate prediction of single-cell DNA methylation states using deep learning
Recent technological advances have enabled DNA methylation to be assayed at single-cell
resolution. However, current protocols are limited by incomplete CpG coverage and hence …
resolution. However, current protocols are limited by incomplete CpG coverage and hence …
[PDF][PDF] FGF signaling inhibition in ESCs drives rapid genome-wide demethylation to the epigenetic ground state of pluripotency
Genome-wide erasure of DNA methylation takes place in primordial germ cells (PGCs) and
early embryos and is linked with pluripotency. Inhibition of Erk1/2 and Gsk3β signaling in …
early embryos and is linked with pluripotency. Inhibition of Erk1/2 and Gsk3β signaling in …
[PDF][PDF] Reprogramming the methylome: erasing memory and creating diversity
The inheritance of epigenetic marks, in particular DNA methylation, provides a molecular
memory that ensures faithful commitment to transcriptional programs during mammalian …
memory that ensures faithful commitment to transcriptional programs during mammalian …
Effect of hamstring-emphasized resistance training on hamstring: quadriceps strength ratios
WR Holcomb, MD Rubley, HJ Lee… - The Journal of …, 2007 - journals.lww.com
A decreased hamstring: quadriceps (H: Q) ratio may put the hamstrings and anterior cruciate
ligament (ACL) at increased risk of injury. Therefore, the purpose of this study was to …
ligament (ACL) at increased risk of injury. Therefore, the purpose of this study was to …
[HTML][HTML] Single-cell epigenomics: powerful new methods for understanding gene regulation and cell identity
Emerging single-cell epigenomic methods are being developed with the exciting potential
to transform our knowledge of gene regulation. Here we review available techniques and …
to transform our knowledge of gene regulation. Here we review available techniques and …
Tracking the embryonic stem cell transition from ground state pluripotency
Mouse embryonic stem (ES) cells are locked into self-renewal by shielding from inductive
cues. Release from this ground state in minimal conditions offers a system for delineating …
cues. Release from this ground state in minimal conditions offers a system for delineating …