[PDF][PDF] Identification of a CpG island methylator phenotype that defines a distinct subgroup of glioma

…, KA Hoadley, DN Hayes, CM Perou, HK Schmidt… - Cancer cell, 2010 - cell.com
We have profiled promoter DNA methylation alterations in 272 glioblastoma tumors in the
context of The Cancer Genome Atlas (TCGA). We found that a distinct subset of samples …

Somatic mutations affect key pathways in lung adenocarcinoma

…, TL Miner, C Pohl, G Fewell, C Haipek, H Schmidt… - Nature, 2008 - nature.com
Determining the genetic basis of cancer requires comprehensive analyses of large collections
of histopathologically well-classified primary tumours. Here we report the results of a …

[HTML][HTML] Recurring mutations found by sequencing an acute myeloid leukemia genome

…, JW Wallis, X Shi, L Lin, H Schmidt… - … England Journal of …, 2009 - Mass Medical Soc
Background The full complement of DNA mutations that are responsible for the pathogenesis
of acute myeloid leukemia (AML) is not yet known. Methods We used massively parallel …

[HTML][HTML] Clonal evolution in relapsed acute myeloid leukaemia revealed by whole-genome sequencing

…, DJ Dooling, RS Fulton, LL Fulton, K Chen, H Schmidt… - Nature, 2012 - nature.com
Most patients with acute myeloid leukaemia (AML) die from progressive disease after relapse,
which is associated with clonal evolution at the cytogenetic level 1 , 2 . To determine the …

Age-related mutations associated with clonal hematopoietic expansion and malignancies

…, KJ Johnson, MC Wendl, JF McMichael, HK Schmidt… - Nature medicine, 2014 - nature.com
Several genetic alterations characteristic of leukemia and lymphoma have been detected in
the blood of individuals without apparent hematological malignancies. The Cancer Genome …

[HTML][HTML] DNMT3A Mutations in Acute Myeloid Leukemia

…, DJ Dooling, DC Koboldt, H Schmidt… - … England Journal of …, 2010 - Mass Medical Soc
Background The genetic alterations responsible for an adverse outcome in most patients
with acute myeloid leukemia (AML) are unknown. Methods Using massively parallel DNA …

[HTML][HTML] The origin and evolution of mutations in acute myeloid leukemia

…, JW Wallis, K Chen, CC Harris, HK Schmidt… - Cell, 2012 - cell.com
Most mutations in cancer genomes are thought to be acquired after the initiating event,
which may cause genomic instability and drive clonal evolution. However, for acute myeloid …

Genome remodelling in a basal-like breast cancer metastasis and xenograft

…, J Hoog, DJ Dooling, DC Koboldt, H Schmidt… - Nature, 2010 - nature.com
Massively parallel DNA sequencing technologies provide an unprecedented ability to
screen entire genomes for genetic changes associated with tumour progression. Here we …

[HTML][HTML] Clonal architecture of secondary acute myeloid leukemia

…, R Abbott, R Fulton, V Magrini, H Schmidt… - … England Journal of …, 2012 - Mass Medical Soc
Background The myelodysplastic syndromes are a group of hematologic disorders that often
evolve into secondary acute myeloid leukemia (AML). The genetic changes that underlie …

[HTML][HTML] Comparative and demographic analysis of orang-utan genomes

…, L Cook, KD Delehaunty, C Fronick, H Schmidt… - Nature, 2011 - nature.com
‘Orang-utan’ is derived from a Malay term meaning ‘man of the forest’ and aptly describes the
southeast Asian great apes native to Sumatra and Borneo. The orang-utan species, Pongo …