User profiles for Heetak Lee
Heetak LeeBioinformatics Team Leader, Center for Genome Engineering, Institute for Basic Science … Verified email at ibs.re.kr Cited by 560 |
[HTML][HTML] OASIS 2: online application for survival analysis 2 with features for the analysis of maximal lifespan and healthspan in aging research
Online application for survival analysis (OASIS) has served as a popular and convenient
platform for the statistical analysis of various survival data, particularly in the field of aging …
platform for the statistical analysis of various survival data, particularly in the field of aging …
[HTML][HTML] Network-based machine learning in colorectal and bladder organoid models predicts anti-cancer drug efficacy in patients
Cancer patient classification using predictive biomarkers for anti-cancer drug responses is
essential for improving therapeutic outcomes. However, current machine-learning-based …
essential for improving therapeutic outcomes. However, current machine-learning-based …
[PDF][PDF] p57Kip2 imposes the reserve stem cell state of gastric chief cells
Adult stem cells constantly react to local changes to ensure tissue homeostasis. In the main
body of the stomach, chief cells produce digestive enzymes; however, upon injury, they …
body of the stomach, chief cells produce digestive enzymes; however, upon injury, they …
[HTML][HTML] Transcriptomes of the tumor-adjacent normal tissues are more informative than tumors in predicting recurrence in colorectal cancer patients
Background Previous investigations of transcriptomic signatures of cancer patient survival
and post-therapy relapse have focused on tumor tissue. In contrast, here we show that in …
and post-therapy relapse have focused on tumor tissue. In contrast, here we show that in …
Divergence of noncoding regulatory elements explains gene–phenotype differences between human and mouse orthologous genes
Mice have been widely used as a model organism to investigate human gene–phenotype
relationships based on a conjecture that orthologous genes generally perform similar …
relationships based on a conjecture that orthologous genes generally perform similar …
[HTML][HTML] Linear motif-mediated interactions have contributed to the evolution of modularity in complex protein interaction networks
The modular architecture of protein-protein interaction (PPI) networks is evident in diverse
species with a wide range of complexity. However, the molecular components that lead to the …
species with a wide range of complexity. However, the molecular components that lead to the …
Intestinal Paneth cell differentiation relies on asymmetric regulation of Wnt signaling by Daam1/2
The mammalian intestine is one of the most rapidly self-renewing tissues, driven by stem
cells residing at the crypt bottom. Paneth cells form a major element of the niche …
cells residing at the crypt bottom. Paneth cells form a major element of the niche …
[HTML][HTML] Energy metabolism and whole-exome sequencing-based analysis of Sasang constitution: a pilot study
Background Traditional Korean Sasang constitutional (SC) medicine categorizes individuals
into four constitutional types [Tae-eum (TE), So-eum (SE), Tae-yang (TY), or So-yang (SY)] …
into four constitutional types [Tae-eum (TE), So-eum (SE), Tae-yang (TY), or So-yang (SY)] …
Acquired epithelial WNT secretion drives niche independence of developing gastric cancer
I Teriyapirom, J Kim, H Lee, SR Merker… - bioRxiv, 2023 - biorxiv.org
Recent studies have shed light on the signaling pathways required for gastric tissue
maintenance and how aberrations in these key pathways lead to gastric cancer development. …
maintenance and how aberrations in these key pathways lead to gastric cancer development. …
An evolution-based machine learning to identify cancer type-specific driver mutations
Identifying cancer type-specific driver mutations is crucial for illuminating distinct pathologic
mechanisms across various tumors and providing opportunities of patient-specific treatment. …
mechanisms across various tumors and providing opportunities of patient-specific treatment. …