User profiles for Henk C Den Bakker
Henk den BakkerUniversity of Georgia Verified email at uga.edu Cited by 6454 |
Listeria monocytogenes lineages: genomics, evolution, ecology, and phenotypic characteristics
Listeria monocytogenes consists of at least 4 evolutionary lineages (I, II, III, and IV) with
different but overlapping ecological niches. Most L. monocytogenes isolates seem to belong to …
different but overlapping ecological niches. Most L. monocytogenes isolates seem to belong to …
Genomic epidemiology: whole-genome-sequencing–powered surveillance and outbreak investigation of foodborne bacterial pathogens
X Deng, HC den Bakker… - Annual review of food …, 2016 - annualreviews.org
As we are approaching the twentieth anniversary of PulseNet, a network of public health and
regulatory laboratories that has changed the landscape of foodborne illness surveillance …
regulatory laboratories that has changed the landscape of foodborne illness surveillance …
Listeria marthii sp. nov., isolated from the natural environment, Finger Lakes National Forest
…, SR Milillo, HC Den Bakker… - … of systematic and …, 2010 - microbiologyresearch.org
Four isolates (FSL S4-120 T , FSL S4-696, FSL S4-710, and FSL S4-965) of Gram-positive,
motile, facultatively anaerobic, non-spore-forming bacilli that were phenotypically similar to …
motile, facultatively anaerobic, non-spore-forming bacilli that were phenotypically similar to …
[HTML][HTML] Comparative genomics of the bacterial genus Listeria: Genome evolution is characterized by limited gene acquisition and limited gene loss
HC den Bakker, CA Cummings, V Ferreira, P Vatta… - BMC genomics, 2010 - Springer
Background The bacterial genus Listeria contains pathogenic and non-pathogenic species,
including the pathogens L. monocytogenes and L. ivanovii, both of which carry homologous …
including the pathogens L. monocytogenes and L. ivanovii, both of which carry homologous …
Listeria booriae sp. nov. and Listeria newyorkensis sp. nov., from food processing environments in the USA
…, M Wiedmann, HC den Bakker - … of systematic and …, 2015 - microbiologyresearch.org
Sampling of seafood and dairy processing facilities in the north-eastern USA produced 18
isolates of Listeria spp. that could not be identified at the species-level using traditional …
isolates of Listeria spp. that could not be identified at the species-level using traditional …
Identification and characterization of psychrotolerant sporeformers associated with fluid milk production and processing
…, ML Ranieri, NH Martin, HC den Bakker… - Applied and …, 2012 - Am Soc Microbiol
Psychrotolerant spore-forming bacteria represent a major challenge to the goal of extending
the shelf life of pasteurized dairy products. The objective of this study was to identify …
the shelf life of pasteurized dairy products. The objective of this study was to identify …
[HTML][HTML] Genome sequencing reveals diversification of virulence factor content and possible host adaptation in distinct subpopulations of Salmonella enterica
HC Den Bakker, AI Moreno Switt, G Govoni… - BMC genomics, 2011 - Springer
Background Divergence of bacterial populations into distinct subpopulations is often the
result of ecological isolation. While some studies have suggested the existence of Salmonella …
result of ecological isolation. While some studies have suggested the existence of Salmonella …
[HTML][HTML] Rapid whole-genome sequencing for surveillance of Salmonella enterica serovar enteritidis
HC Den Bakker, MW Allard, D Bopp… - Emerging infectious …, 2014 - ncbi.nlm.nih.gov
For Salmonella enterica serovar Enteritidis, 85% of isolates can be classified into 5 pulsed-field
gel electrophoresis (PFGE) types. However, PFGE has limited discriminatory power for …
gel electrophoresis (PFGE) types. However, PFGE has limited discriminatory power for …
Listeria floridensis sp. nov., Listeria aquatica sp. nov., Listeria cornellensis sp. nov., Listeria riparia sp. nov. and Listeria grandensis sp. nov., from agricultural and …
HC den Bakker, S Warchocki… - … of systematic and …, 2014 - microbiologyresearch.org
Sampling of agricultural and natural environments in two US states (Colorado and Florida)
yielded 18 Listeria-like isolates that could not be assigned to previously described species …
yielded 18 Listeria-like isolates that could not be assigned to previously described species …
[HTML][HTML] Dissemination of the mcr-1 colistin resistance gene
…, M Marault, Y Millemann, HC den Bakker… - The Lancet Infectious …, 2016 - thelancet.com
In response to the Yi-Yun Liu and colleagues’ finding of a mobile genetic element responsible
for colistin resistance, mcr-1, 1 and the accompanying Comment asking “is plasmid-…
for colistin resistance, mcr-1, 1 and the accompanying Comment asking “is plasmid-…