Global phylogeography and ancient evolution of the widespread human gut virus crAssphage
…, C Wijmenga, MM Zambrano, H Zschach… - Nature …, 2019 - nature.com
Microbiomes are vast communities of microorganisms and viruses that populate all natural
ecosystems. Viruses have been considered to be the most variable component of …
ecosystems. Viruses have been considered to be the most variable component of …
[HTML][HTML] HostPhinder: a phage host prediction tool
The current dramatic increase of antibiotic resistant bacteria has revitalised the interest in
bacteriophages as alternative antibacterial treatment. Meanwhile, the development of …
bacteriophages as alternative antibacterial treatment. Meanwhile, the development of …
[HTML][HTML] Accurate protein stability predictions from homology models
A Valanciute, L Nygaard, H Zschach… - Computational and …, 2023 - Elsevier
Calculating changes in protein stability (ΔΔG) has been shown to be central for predicting
the consequences of single amino acid substitutions in protein engineering as well as …
the consequences of single amino acid substitutions in protein engineering as well as …
[HTML][HTML] What can we learn from a metagenomic analysis of a Georgian bacteriophage cocktail?
H Zschach, KG Joensen, B Lindhard, O Lund… - Viruses, 2015 - mdpi.com
… Joensen and Henrike Zschach performed the laboratory work. Katrine G. Joensen provided
… Henrike Zschach performed the rest of the data analysis. Henrik Hasman supplied bacterial …
… Henrike Zschach performed the rest of the data analysis. Henrik Hasman supplied bacterial …
Interpreting the molecular mechanisms of disease variants in human transmembrane proteins
JKS Tiemann, H Zschach, K Lindorff-Larsen, A Stein - Biophysical Journal, 2023 - cell.com
Next-generation sequencing of human genomes reveals millions of missense variants, some
of which may lead to loss of protein function and ultimately disease. Here, we investigate …
of which may lead to loss of protein function and ultimately disease. Here, we investigate …
[HTML][HTML] Evolutionary study of the crassphage virus at gene level
crAss-like viruses are a putative family of bacteriophages recently discovered. The eponym
of the clade, crAssphage, is an enteric bacteriophage estimated to be present in at least half …
of the clade, crAssphage, is an enteric bacteriophage estimated to be present in at least half …
[HTML][HTML] Use of a regression model to study host-genomic determinants of phage susceptibility in MRSA
Staphylococcus aureus is a major agent of nosocomial infections. Especially in methicillin-resistant
strains, conventional treatment options are limited and expensive, which has fueled a …
strains, conventional treatment options are limited and expensive, which has fueled a …
Biofilms and core pathogens shape the tumour microenvironment and immune phenotype in colorectal cancer
Objective: Increasing evidence links bacterial dysbiosis with colorectal cancer (CRC)
carcinogenesis, with enrichment of core pathogens such as Bacteroides fragilis and Fusobacterium …
carcinogenesis, with enrichment of core pathogens such as Bacteroides fragilis and Fusobacterium …
Global phylogeography and ancient evolution of the widespread human gut virus crAssphage
Microbiomes are vast communities of microorganisms and viruses that populate all natural
ecosystems. Viruses have been considered to be the most variable component of …
ecosystems. Viruses have been considered to be the most variable component of …
Genomics of phages with therapeutic potential
H Zschach - 2017 - orbit.dtu.dk
Bacteriophages, viruses that prey on bacteria, have been applied since the 1920’s to treat
and prevent bacterial infection. After the discovery of antibiotics, this route was however …
and prevent bacterial infection. After the discovery of antibiotics, this route was however …