Epigenetic programming of monocyte-to-macrophage differentiation and trained innate immunity
Introduction Monocytes circulate in the bloodstream for up to 3 to 5 days. Concomitantly,
immunological imprinting of either tolerance (immunosuppression) or trained immunity (innate …
immunological imprinting of either tolerance (immunosuppression) or trained immunity (innate …
[PDF][PDF] Whole-genome bisulfite sequencing of two distinct interconvertible DNA methylomes of mouse embryonic stem cells
…, AB Brinkman, J Arand, LI Kroeze, HHD Kerstens… - Cell stem cell, 2013 - cell.com
The use of two kinase inhibitors (2i) enables derivation of mouse embryonic stem cells (ESCs)
in the pluripotent ground state. Using whole-genome bisulfite sequencing (WGBS), we …
in the pluripotent ground state. Using whole-genome bisulfite sequencing (WGBS), we …
Transcriptional diversity during lineage commitment of human blood progenitors
…, R Guigo, D Hampshire, AM Kelly, HHD Kerstens… - Science, 2014 - science.org
Introduction Blood production in humans culminates in the daily release of around 10 11
cells into the circulation, mainly platelets and red blood cells. All blood cells originate from a …
cells into the circulation, mainly platelets and red blood cells. All blood cells originate from a …
[HTML][HTML] An organoid biobank for childhood kidney cancers that captures disease and tissue heterogeneity
…, L Custers, H Begthel, HHD Kerstens… - Nature …, 2020 - nature.com
Kidney tumours are among the most common solid tumours in children, comprising distinct
subtypes differing in many aspects, including cell-of-origin, genetics, and pathology. Pre-…
subtypes differing in many aspects, including cell-of-origin, genetics, and pathology. Pre-…
[HTML][HTML] Dynamics of gene silencing during X inactivation using allele-specific RNA-seq
H Marks, HHD Kerstens, TS Barakat, E Splinter… - Genome biology, 2015 - Springer
Background During early embryonic development, one of the two X chromosomes in mammalian
female cells is inactivated to compensate for a potential imbalance in transcript levels …
female cells is inactivated to compensate for a potential imbalance in transcript levels …
SMIM1 underlies the Vel blood group and influences red blood cell traits
…, VG Haver, G Jordan, J Karjalainen, HHD Kerstens… - Nature …, 2013 - nature.com
The blood group Vel was discovered 60 years ago 1 , but the underlying gene is unknown.
Individuals negative for the Vel antigen are rare and are required for the safe transfusion of …
Individuals negative for the Vel antigen are rare and are required for the safe transfusion of …
[HTML][HTML] Genome wide SNP discovery, analysis and evaluation in mallard (Anas platyrhynchos)
RHS Kraus, HHD Kerstens, P Van Hooft… - Bmc Genomics, 2011 - Springer
Background Next generation sequencing technologies allow to obtain at low cost the
genomic sequence information that currently lacks for most economically and ecologically …
genomic sequence information that currently lacks for most economically and ecologically …
[HTML][HTML] Large scale single nucleotide polymorphism discovery in unsequenced genomes using second generation high throughput sequencing technology: applied …
HHD Kerstens, RPMA Crooijmans, A Veenendaal… - BMC genomics, 2009 - Springer
Background The development of second generation sequencing methods has enabled large
scale DNA variation studies at moderate cost. For the high throughput discovery of single …
scale DNA variation studies at moderate cost. For the high throughput discovery of single …
[HTML][HTML] Comparison of linkage disequilibrium and haplotype diversity on macro-and microchromosomes in chicken
…, RPMA Crooijmans, JWM Bastiaansen, HHD Kerstens… - BMC genetics, 2009 - Springer
Background The chicken (Gallus gallus), like most avian species, has a very distinct
karyotype consisting of many micro- and a few macrochromosomes. While it is known that …
karyotype consisting of many micro- and a few macrochromosomes. While it is known that …
Genome‐wide SNP detection in the great tit Parus major using high throughput sequencing
NEMVAN BERS, K Oers, HHD Kerstens… - Molecular …, 2010 - Wiley Online Library
Identifying genes that underlie ecological traits will open exiting possibilities to study gene–environment
interactions in shaping phenotypes and in measuring natural selection on genes…
interactions in shaping phenotypes and in measuring natural selection on genes…