QTL‐seq: rapid mapping of quantitative trait loci in rice by whole genome resequencing of DNA from two bulked populations
…, C Mitsuoka, A Uemura, H Utsushi… - The Plant …, 2013 - Wiley Online Library
The majority of agronomically important crop traits are quantitative, meaning that they are
controlled by multiple genes each with a small effect (quantitative trait loci, QTL s). Mapping …
controlled by multiple genes each with a small effect (quantitative trait loci, QTL s). Mapping …
MutMap accelerates breeding of a salt-tolerant rice cultivar
…, H Yaegashi, T Obara, K Oikawa, H Utsushi… - Nature …, 2015 - nature.com
OsRR22 encodes a 696-amino-acid B-type response regulator protein with a predicted N-terminal
receiver domain and a C-terminal Myb-like DNA-binding domain, which probably …
receiver domain and a C-terminal Myb-like DNA-binding domain, which probably …
[HTML][HTML] MutMap+: genetic mapping and mutant identification without crossing in rice
…, H Matsumura, H Saitoh, C Mitsuoka, H Utsushi… - PloS one, 2013 - journals.plos.org
Advances in genome sequencing technologies have enabled researchers and breeders to
rapidly associate phenotypic variation to genome sequence differences. We recently took …
rapidly associate phenotypic variation to genome sequence differences. We recently took …
MutMap‐Gap: whole‐genome resequencing of mutant F2 progeny bulk combined with de novo assembly of gap regions identifies the rice blast resistance gene Pii
Next‐generation sequencing allows the identification of mutations responsible for mutant
phenotypes by whole‐genome resequencing and alignment to a reference genome. However, …
phenotypes by whole‐genome resequencing and alignment to a reference genome. However, …
Rice Exo70 interacts with a fungal effector, AVR‐Pii, and is required for AVR‐Pii‐triggered immunity
…, K Yoshida, H Kanzaki, E Kanzaki, H Utsushi… - The Plant …, 2015 - Wiley Online Library
Vesicle trafficking including the exocytosis pathway is intimately associated with host immunity
against pathogens. However, we still have insufficient knowledge about how it contributes …
against pathogens. However, we still have insufficient knowledge about how it contributes …
[HTML][HTML] Discovery of nucleotide polymorphisms in the Musa gene pool by Ecotilling
…, L Sági, OA Huynh, H Utsushi… - Theoretical and applied …, 2010 - Springer
Musa (banana and plantain) is an important genus for the global export market and in local
markets where it provides staple food for approximately 400 million people. Hybridization …
markets where it provides staple food for approximately 400 million people. Hybridization …
An unconventional NOI/RIN4 domain of a rice NLR protein binds host EXO70 protein to confer fungal immunity
K Fujisaki, Y Abe, E Kanzaki, K Ito, H Utsushi, H Saitoh… - BioRxiv, 2017 - biorxiv.org
A subset of plant nucleotide-binding domain and leucine-rich repeat-containing (NLR)
proteins carry extraneous integrated domains that have been proposed to mediate pathogen …
proteins carry extraneous integrated domains that have been proposed to mediate pathogen …
The tillering phenotype of the rice plastid terminal oxidase (PTOX) loss‐of‐function mutant is associated with strigolactone deficiency
The significance of plastid terminal oxidase ( PTOX ) in phytoene desaturation and
chloroplast function has been demonstrated using PTOX ‐deficient mutants, particularly in …
chloroplast function has been demonstrated using PTOX ‐deficient mutants, particularly in …
[HTML][HTML] Rice apoplastic CBM1-interacting protein counters blast pathogen invasion by binding conserved carbohydrate binding module 1 motif of fungal proteins
…, H Saitoh, K Fujisaki, K Ishikawa, H Utsushi… - PLoS …, 2022 - journals.plos.org
When infecting plants, fungal pathogens secrete cell wall-degrading enzymes (CWDEs) that
break down cellulose and hemicellulose, the primary components of plant cell walls. Some …
break down cellulose and hemicellulose, the primary components of plant cell walls. Some …
Sat-BSA: an NGS-based method using local de novo assembly of long reads for rapid identification of genomic structural variations associated with agronomic traits
…, N Itoh, M Asukai, A Uemura, K Oikawa, H Utsushi… - Breeding …, 2021 - jstage.jst.go.jp
Advances in next generation sequencing (NGS)-based methodologies have accelerated
the identifications of simple genetic variants such as point mutations and small insertions/…
the identifications of simple genetic variants such as point mutations and small insertions/…