[HTML][HTML] Causes and implications of codon usage bias in RNA viruses

IS Belalov, AN Lukashev - PloS one, 2013 - journals.plos.org
Choice of synonymous codons depends on nucleotide/dinucleotide composition of the
genome (termed mutational pressure) and relative abundance of tRNAs in a cell (translational …

Recombination strategies and evolutionary dynamics of the Human enterovirus A global gene pool

…, EY Shumilina, IS Belalov… - Journal of General …, 2014 - microbiologyresearch.org
We analysed natural recombination in 79 Human enterovirus A strains representing 13
serotypes by sequencing of VP1, 2C and 3D genome regions. The half-life of a non-recombinant …

[HTML][HTML] RB49-like Bacteriophages Recognize O Antigens as One of the Alternative Primary Receptors

…, AK Golomidova, EE Kulikov, IS Belalov… - International Journal of …, 2022 - mdpi.com
The power of most of the enterobacterial O antigen types to provide robust protection
against direct recognition of the cell surface by bacteriophage receptor-recognition proteins (RBP) …

Two novel Erwinia amylovora bacteriophages, Loshitsa2 and Micant, isolated in Belarus

…, AV Letarov, EE Kulikov, VV Babenko, IS Belalov… - Archives of …, 2022 - Springer
The complete genomes of the new Erwinia amylovora bacteriophages Loshitsa2 and Micant
are 43,092 bp and 43,028 bp long, respectively, encode 51 putative proteins, and have two …

[HTML][HTML] Searching for fat tails in CRISPR-Cas systems: Data analysis and mathematical modeling

…, D Paez-Espino, AY Morozov, IS Belalov - PLoS computational …, 2021 - journals.plos.org
Understanding CRISPR-Cas systems—the adaptive defence mechanism that about half of
bacterial species and most of archaea use to neutralise viral attacks—is important for …

Genetic variation and recombination in Aichi virus

AN Lukashev, JF Drexler, IS Belalov… - Journal of general …, 2012 - microbiologyresearch.org
Aichi virus (AiV), a member of the genus Kobuvirus in the family Picornaviridae, causes
gastroenteritis in humans. It was noted that AiV differs from other picornaviruses in its unusually …

Recombination in hepatitis A virus: evidence for reproductive isolation of genotypes

IS Belalov, OV Isaeva… - Journal of general …, 2011 - microbiologyresearch.org
This study analysed phylogenetic evidence of recombination in sequences of hepatitis A
virus (HAV) available in international databases. Isolation of distinct recombinant HAV strains …

[HTML][HTML] The ecogenomics of dsDNA bacteriophages in feces of stabled and feral horses

…, MA Letarova, DN Konanov, IS Belalov… - Computational and …, 2020 - Elsevier
The viromes of the mammalian lower gut were shown to be heavily dominated by
bacteriophages; however, only for humans were the composition and intervariability of the …

Equine intestinal O-seroconverting temperate coliphage Hf4s: genomic and biological characterization

…, AK Golomidova, AD Efimov, IS Belalov… - Applied and …, 2021 - Am Soc Microbiol
Tailed bacteriophages constitute the bulk of the intestinal viromes of vertebrate animals.
However, the relationships between lytic and lysogenic lifestyles of phages in these ecosystems …

The metastable associations of bacteriophages and Erwinia amylovora

…, MA Letarova, VV Babenko, IS Belalov… - Archives of …, 2023 - Springer
Bacteriophages are often considered as possible agents of biological control of unwanted
bacterial populations in medicine, agriculture and food industry. Although the virulent phages …