A pendulum of induction between the epiblast and extra-embryonic endoderm supports post-implantation progression

…, LR Fuentes, IM Guerreiro… - …, 2022 - journals.biologists.com
Embryogenesis is supported by dynamic loops of cellular interactions. Here, we create a
partial mouse embryo model to elucidate the principles of epiblast (Epi) and extra-embryonic …

[PDF][PDF] Chemically-defined induction of a primitive endoderm and epiblast-like niche supports post-implantation progression from blastoids

EJ Vrij, S op Reimer, JF Aldeguer, IM Guerreiro, J Kind… - BioRxiv, 2019 - academia.edu
The early mammalian conceptus (blastocyst) contains two supporting extraembryonic
tissues-the trophectoderm and the primitive endoderm (PrE)-that encase and guide the epiblast (…

Self-organization of post-implantation-like embryonic tissues from blastoids

…, Y Scholte op Reimer, J Frias Aldeguer, IM Guerreiro… - BioRxiv, 2019 - biorxiv.org
The early mammalian conceptus (blastocyst) contains two supporting extraembryonic tissues
- the trophectoderm and the primitive endoderm (PrE) - that encase and guide the epiblast (…

Modeling of DNA methylation in cis reveals principles of chromatin folding in vivo in the absence of crosslinking and ligation

…, Y Zhan, C Valdes, M Kryzhanovska, IM Guerreiro… - bioRxiv, 2018 - biorxiv.org
Mammalian chromosomes are folded into an intricate hierarchy of structural domains, within
which topologically associating domains (TADs) and CTCF-associated loops partition the …

Analysis of Hox10 specific peptide motifs in their patterning functions of the axial skeleton

IM Guerreiro - 2009 - search.proquest.com
Hox genes play a fundamental role in anterior-posterior patterning and are remarkably
conserved throughout evolution (Slack et al., 1993). Their products are transcription factors that …

Framework for integrating scRNA-seq and scATAC-seq to reveal signatures and trajectories of immune cells

C Schieler - 2022 - studenttheses.uu.nl
Studying the dynamics and epigenetic signatures of immune cells is important to understand
the differences in immune response of individuals. Vast amount of scRNA-seq and scATAC-…

H3K27me3 dictates atypical genome-nuclear lamina interactions and allelic asymmetry during early embryogenesis

I Guerreiro, FJ Rang, YK Kawamura, FC Groenveld… - bioRxiv, 2023 - biorxiv.org
The very first days of mammalian embryonic development are accompanied by epigenetic
reprogramming and extensive changes in nuclear organization. In particular, genomic regions …

Single-cell and spatial transcriptomics reveal somitogenesis in gastruloids

SC van den Brink, A Alemany, V van Batenburg… - Nature, 2020 - nature.com
Gastruloids are three-dimensional aggregates of embryonic stem cells that display key
features of mammalian development after implantation, including germ-layer specification and …

High frequency of TARDBP gene mutations in Italian patients with amyotrophic lateral sclerosis

L Corrado, A Ratti, C Gellera, E Buratti… - Human …, 2009 - Wiley Online Library
Recent studies identified rare missense mutations in amyotrophic lateral sclerosis (ALS)
patients in the TARDBP gene encoding TAR DNA binding protein (TDP)‐43, the major protein …

Simulation of biologically inspired object movement for the study of object tracking algorithms

PFG Canelas - 2016 - search.proquest.com
Major advances in Cell and Molecular Biology have been associated with the advances in
live-cell microscopy imaging, and these studies started to rely on temporal single cell imaging…