User profiles for Ivo F. Sbalzarini

Ivo F. Sbalzarini

TU Dresden & Max Planck Institute of Molecular Cell Biology and Genetics
Verified email at mpi-cbg.de
Cited by 8135

Feature point tracking and trajectory analysis for video imaging in cell biology

IF Sbalzarini, P Koumoutsakos - Journal of structural biology, 2005 - Elsevier
This paper presents a computationally efficient, two-dimensional, feature point tracking
algorithm for the automated detection and quantitative analysis of particle trajectories as …

[HTML][HTML] Objective comparison of particle tracking methods

…, I Smal, F De Chaumont, M Maška, IF Sbalzarini… - Nature …, 2014 - nature.com
Particle tracking is of key importance for quantitative analysis of intracellular dynamic
processes from time-lapse microscopy image data. Because manually detecting and following …

PPM–A highly efficient parallel particle–mesh library for the simulation of continuum systems

IF Sbalzarini, JH Walther, M Bergdorf, SE Hieber… - Journal of …, 2006 - Elsevier
This paper presents a highly efficient parallel particle–mesh (PPM) library, based on a unifying
particle formulation for the simulation of continuous systems. In this formulation, the grid-…

Curvature filters efficiently reduce certain variational energies

Y Gong, IF Sbalzarini - IEEE Transactions on Image Processing, 2017 - ieeexplore.ieee.org
In image processing, the rapid approximate solution of variational problems involving
generic data-fitting terms is often of practical relevance, for example in real-time applications. …

[PDF][PDF] Multiobjective optimization using evolutionary algorithms

IF Sbalzarini, S Müller, P Koumoutsakos - Proceedings of the summer …, 2000 - stanford.edu
Multiobjective evolutionary algorithms for shape optimization of electrokinetic micro channels
have been developed and implemented. An extension to the Strength Pareto Approach …

Single-particle tracking of murine polyoma virus-like particles on live cells and artificial membranes

H Ewers, AE Smith, IF Sbalzarini… - Proceedings of the …, 2005 - National Acad Sciences
The lateral mobility of individual murine polyoma virus–like particles (VLPs) bound to live
cells and artificial lipid bilayers was studied by single fluorescent particle tracking using total …

Segmentation and quantification of subcellular structures in fluorescence microscopy images using Squassh

…, A Niemann, U Ziegler, P Berger, IF Sbalzarini - Nature protocols, 2014 - nature.com
Detection and quantification of fluorescently labeled molecules in subcellular compartments
is a key step in the analysis of many cell biological processes. Pixel-wise colocalization …

ClearVolume: open-source live 3D visualization for light-sheet microscopy

…, U Günther, N Maghelli, F Jug, IF Sbalzarini… - Nature …, 2015 - nature.com
To the Editor: Current state-of-the-art light-sheet microscopes rely on sophisticated control
software to perform the acquisition of gigabytes of image data per second over the course of …

Thermophoretic motion of water nanodroplets confined inside carbon nanotubes

…, JH Walther, P Koumoutsakos, IF Sbalzarini - Nano …, 2009 - ACS Publications
We study the thermophoretic motion of water nanodroplets confined inside carbon nanotubes
using molecular dynamics simulations. We find that the nanodroplets move in the direction …

Self-organized shape dynamics of active surfaces

…, F Jülicher, IF Sbalzarini - Proceedings of the …, 2019 - National Acad Sciences
Mechanochemical processes in thin biological structures, such as the cellular cortex or epithelial
sheets, play a key role during the morphogenesis of cells and tissues. In particular, they …