We present the results for CAPRI Round 50, the fourth joint CASP‐CAPRI protein assembly
prediction challenge. The Round comprised a total of twelve targets, including six dimers, …

We present the performance of HADDOCK, our information-driven docking software, in the
second edition of the D3R Grand Challenge. In this blind experiment, participants were …

We present the results for CAPRI Round 46, the third joint CASP‐CAPRI protein assembly
prediction challenge. The Round comprised a total of 20 targets including 14 homo‐oligomers …

Predicting the structure and thermodynamics of protein–protein interactions (PPIs) are key
to a proper understanding and modulation of their function. Since experimental methods …

… t i j between g i and g j ⁠. As for the rotational movement, the movement in the quaternion
space is calculated using the spherical linear interpolation (SLERP) (Morrison and Jack, 1992) …

Antibodies, and antibody derivatives such as nanobodies, contain immunoglobulin-like (Ig)
β-sandwich scaffolds which anchor the hypervariable antigen-binding loops and constitute …

We present the results for CAPRI Round 54, the 5th joint CASP‐CAPRI protein assembly
prediction challenge. The Round offered 37 targets, including 14 homodimers, 3 homo‐trimers, …

Antibodies are Y-shaped proteins essential for immune response. Their capability to recognize
antigens with high specificity makes them excellent therapeutic targets. Understanding …

Predicting the 3D structure of protein interactions remains a challenge in the field of
computational structural biology. This is in part due to difficulties in sampling the complex energy …

Anaerobic bacteria from the human microbiome produce a wide array of molecules at high
concentrations that can directly or indirectly affect the host. The production of these molecules…