User profiles for J. Severin
Jessica SeverinRIKEN Verified email at gsc.riken.jp Cited by 21014 |
A conditional knockout resource for the genome-wide study of mouse gene function
Gene targeting in embryonic stem cells has become the principal technology for manipulation
of the mouse genome, offering unrivalled accuracy in allele design and access to …
of the mouse genome, offering unrivalled accuracy in allele design and access to …
EnsemblCompara GeneTrees: Complete, duplication-aware phylogenetic trees in vertebrates
We have developed a comprehensive gene orientated phylogenetic resource, EnsemblCompara
GeneTrees, based on a computational pipeline to handle clustering, multiple alignment…
GeneTrees, based on a computational pipeline to handle clustering, multiple alignment…
Genomic analysis of diversity, population structure, virulence, and antimicrobial resistance in Klebsiella pneumoniae, an urgent threat to public health
…, J Severin, S Brisse, H Cao, J Wilksch… - Proceedings of the …, 2015 - National Acad Sciences
Klebsiella pneumoniae is now recognized as an urgent threat to human health because of
the emergence of multidrug-resistant strains associated with hospital outbreaks and …
the emergence of multidrug-resistant strains associated with hospital outbreaks and …
An atlas of human long non-coding RNAs with accurate 5′ ends
Long non-coding RNAs (lncRNAs) are largely heterogeneous and functionally uncharacterized.
Here, using FANTOM5 cap analysis of gene expression (CAGE) data, we integrate …
Here, using FANTOM5 cap analysis of gene expression (CAGE) data, we integrate …
Ensembl 2007
The Ensembl ( ) project provides a comprehensive and integrated source of annotation of
chordate genome sequences. Over the past year the number of genomes available from …
chordate genome sequences. Over the past year the number of genomes available from …
A systematic review and meta-analyses show that carbapenem use and medical devices are the leading risk factors for carbapenem-resistant Pseudomonas …
AF Voor in 't holt, JA Severin… - Antimicrobial agents …, 2014 - Am Soc Microbiol
A systematic review and meta-analyses were performed to identify the risk factors associated
with carbapenem-resistant Pseudomonas aeruginosa and to identify sources and …
with carbapenem-resistant Pseudomonas aeruginosa and to identify sources and …
[HTML][HTML] Gateways to the FANTOM5 promoter level mammalian expression atlas
M Lizio, J Harshbarger, H Shimoji, J Severin… - Genome biology, 2015 - Springer
The FANTOM5 project investigates transcription initiation activities in more than 1,000 human
and mouse primary cells, cell lines and tissues using CAGE. Based on manual curation of …
and mouse primary cells, cell lines and tissues using CAGE. Based on manual curation of …
Transcribed enhancers lead waves of coordinated transcription in transitioning mammalian cells
…, S Nagao-Sato, J Severin, MJL de Hoon, J Kawai… - Science, 2015 - science.org
Although it is generally accepted that cellular differentiation requires changes to transcriptional
networks, dynamic regulation of promoters and enhancers at specific sets of genes has …
networks, dynamic regulation of promoters and enhancers at specific sets of genes has …
An integrated expression atlas of miRNAs and their promoters in human and mouse
MicroRNAs (miRNAs) are short non-coding RNAs with key roles in cellular regulation. As part
of the fifth edition of the Functional Annotation of Mammalian Genome (FANTOM5) project, …
of the fifth edition of the Functional Annotation of Mammalian Genome (FANTOM5) project, …
Discovery of potent nonpeptide inhibitors of stromelysin using SAR by NMR
…, GM Carrera, PA Marcotte, J Severin… - Journal of the …, 1997 - ACS Publications
With the use of an NMR-based method, potent (IC 50 < 25 nM) nonpeptide inhibitors of the
matrix metalloproteinase stromelysin (MMP-3) were discovered. The method, called SAR by …
matrix metalloproteinase stromelysin (MMP-3) were discovered. The method, called SAR by …