User profiles for J. Vant
John VantPostdoctoral Research Associate, Oak Ridge National Lab Verified email at ornl.gov Cited by 376 |
ChAdOx1 interacts with CAR and PF4 with implications for thrombosis with thrombocytopenia syndrome
Vaccines derived from chimpanzee adenovirus Y25 (ChAdOx1), human adenovirus type 26
(HAdV-D26), and human adenovirus type 5 (HAdV-C5) are critical in combatting the severe …
(HAdV-D26), and human adenovirus type 5 (HAdV-C5) are critical in combatting the severe …
[PDF][PDF] Atoms to phenotypes: molecular design principles of cellular energy metabolism
…, M Sener, U Kleinekathöfer, JW Vant, J Nguyen… - Cell, 2019 - cell.com
We report a 100-million atom-scale model of an entire cell organelle, a photosynthetic
chromatophore vesicle from a purple bacterium, that reveals the cascade of energy conversion …
chromatophore vesicle from a purple bacterium, that reveals the cascade of energy conversion …
Exploring cryo-electron microscopy with molecular dynamics
Single particle analysis cryo-electron microscopy (EM) and molecular dynamics (MD) have
been complimentary methods since cryo-EM was first applied to the field of structural biology. …
been complimentary methods since cryo-EM was first applied to the field of structural biology. …
Breast cancer metastasis: markers and models
B Weigelt, JL Peterse, LJ Van't Veer - Nature reviews cancer, 2005 - nature.com
Breast cancer starts as a local disease, but it can metastasize to the lymph nodes and distant
organs. At primary diagnosis, prognostic markers are used to assess whether the transition …
organs. At primary diagnosis, prognostic markers are used to assess whether the transition …
[PDF][PDF] CryoFold: Determining protein structures and data-guided ensembles from cryo-EM density maps
Cryoelectron microscopy requires molecular modeling for refinement of structures. Ensemble
models arrive at low free-energy molecular structures, but are computationally expensive …
models arrive at low free-energy molecular structures, but are computationally expensive …
Nitric oxide and bone
RJ Van'T Hof, SH Ralston - Immunology, 2001 - Wiley Online Library
Nitric oxide (NO) is a free radical which has important effects on bone cell function. The
endothelial isoform of nitric oxide synthase (eNOS) is widely expressed in bone on a constitutive …
endothelial isoform of nitric oxide synthase (eNOS) is widely expressed in bone on a constitutive …
Flexible fitting of small molecules into electron microscopy maps using molecular dynamics simulations with neural network potentials
Despite significant advances in resolution, the potential for cryo-electron microscopy (EM) to
be used in determining the structures of protein–drug complexes remains unrealized. …
be used in determining the structures of protein–drug complexes remains unrealized. …
Gene expression profiling predicts clinical outcome of breast cancer
LJ Van't Veer, H Dai, MJ Van De Vijver, YD He… - nature, 2002 - nature.com
Breast cancer patients with the same stage of disease can have markedly different treatment
responses and overall outcome. The strongest predictors for metastases (for example, …
responses and overall outcome. The strongest predictors for metastases (for example, …
[HTML][HTML] A gene-expression signature as a predictor of survival in breast cancer
MJ Van De Vijver, YD He, LJ Van't Veer… - … England Journal of …, 2002 - Mass Medical Soc
Background A more accurate means of prognostication in breast cancer will improve the
selection of patients for adjuvant systemic therapy. Methods Using microarray analysis to …
selection of patients for adjuvant systemic therapy. Methods Using microarray analysis to …
[PDF][PDF] Multiplatform analysis of 12 cancer types reveals molecular classification within and across tissues of origin
Recent genomic analyses of pathologically defined tumor types identify "within-a-tissue"
disease subtypes. However, the extent to which genomic signatures are shared across tissues …
disease subtypes. However, the extent to which genomic signatures are shared across tissues …