User profiles for J. Warwick-Dugdale
Joanna Warwick-DugdalePostdoctoral Research Assistant, Marine Biological Association Verified email at mba.ac.uk Cited by 3006 |
[HTML][HTML] Host-hijacking and planktonic piracy: how phages command the microbial high seas
Microbial communities living in the oceans are major drivers of global biogeochemical cycles.
With nutrients limited across vast swathes of the ocean, marine microbes eke out a living …
With nutrients limited across vast swathes of the ocean, marine microbes eke out a living …
[HTML][HTML] Long-read viral metagenomics captures abundant and microdiverse viral populations and their niche-defining genomic islands
J Warwick-Dugdale, N Solonenko, K Moore, L Chittick… - PeerJ, 2019 - peerj.com
Marine viruses impact global biogeochemical cycles via their influence on host community
structure and function, yet our understanding of viral ecology is constrained by limitations in …
structure and function, yet our understanding of viral ecology is constrained by limitations in …
[HTML][HTML] VirION2: a short-and long-read sequencing and informatics workflow to study the genomic diversity of viruses in nature
…, J Warwick-Dugdale, R Ghosh, J Pett-Ridge… - PeerJ, 2021 - peerj.com
Microbes play fundamental roles in shaping natural ecosystem properties and functions, but
do so under constraints imposed by their viral predators. However, studying viruses in …
do so under constraints imposed by their viral predators. However, studying viruses in …
Long-read viral metagenomics enables capture of abundant and microdiverse viral populations and their niche-defining genomic islands
J Warwick-Dugdale, N Solonenko, K Moore, L Chittick… - bioRxiv, 2018 - biorxiv.org
Marine viruses impact global biogeochemical cycles via their influence on host community
structure and function, yet our understanding of viral ecology is constrained by limitations in …
structure and function, yet our understanding of viral ecology is constrained by limitations in …
[PDF][PDF] Long-read metagenomics reveals cryptic and abundant marine viruses
J Warwick-Dugdale, N Solonenko, K Moore… - …, 2018 - pdfs.semanticscholar.org
Marine bacteriophages impact global biogeochemical cycles via their influence on host
community structure and function 1, yet our understanding of viral ecology is constrained by …
community structure and function 1, yet our understanding of viral ecology is constrained by …
Long-read powered viral metagenomics in the Oligotrophic Sargasso Sea
In the summer months, the waters of the Sargasso Sea are nutrient-limited and strongly
stratified, serving as a model system for the predicted warmer and nutrient-limited oceans of the …
stratified, serving as a model system for the predicted warmer and nutrient-limited oceans of the …
A Intro
W Bell, J Warwick-Dugdale, B Temperton - 1978 - tempertonlab.github.io
Method ● Read quality control● Metagenomic assembly● Coverage vs other samples●
Visualisation, kmer counting and t-SNE calculation● Automated binning software via …
Visualisation, kmer counting and t-SNE calculation● Automated binning software via …
What factors structure Anthozoan microbial communities?
J Warwick-Dugdale - 2013 - pearl.plymouth.ac.uk
The coral holobiont is a complex and diverse composition of organisms including algae,
bacteria and viruses. A number of factors suggested as vital in shaping these communities are …
bacteria and viruses. A number of factors suggested as vital in shaping these communities are …
Viral genetic sequencing identifies staff transmission of COVID-19 is important in a community hospital outbreak
…, C Auckland, M Michelsen, J Warwick-Dugdale… - medRxiv, 2021 - medrxiv.org
Background We have successfully used whole-genome sequencing to provide additional
information for transmission pathways in infectious spread. We report and interpret genomic …
information for transmission pathways in infectious spread. We report and interpret genomic …
Improving marine viral metagenomics through long read sequencing
J Warwick-Dugdale - 2022 - ore.exeter.ac.uk
As arch manipulators of their host communities’, marine phages (viruses of bacteria) are key
players in global biogeochemical cycles. Phage-mediated host lysis is a critical component …
players in global biogeochemical cycles. Phage-mediated host lysis is a critical component …