User profiles for Jack M. Colicchio

Jack Colicchio

Plant and Microbial Biology, University of California Berkeley
Verified email at berkeley.edu
Cited by 538

Replicate altitudinal clines reveal that evolutionary flexibility underlies adaptation to drought stress in annual Mimulus guttatus

NJ Kooyers, AB Greenlee, JM Colicchio, M Oh… - New …, 2015 - Wiley Online Library
Examining how morphology, life history and physiology vary along environmental clines
can reveal functional insight into adaptations to climate and thus inform predictions about …

Empirical patterns of environmental variation favor adaptive transgenerational plasticity

JM Colicchio, J Herman - Ecology and Evolution, 2020 - Wiley Online Library
Abstract Effects of parental environment on offspring traits have been well known for decades.
Interest in this transgenerational form of phenotypic plasticity has recently surged due to …

[HTML][HTML] DNA methylation and gene expression in Mimulus guttatus

JM Colicchio, F Miura, JK Kelly, T Ito, LC Hileman - BMC genomics, 2015 - Springer
Background The presence of methyl groups on cytosine nucleotides across an organism’s
genome (methylation) is a major regulator of genome stability, crossing over, and gene …

Lagging adaptation to climate supersedes local adaptation to herbivory in an annual monkeyflower

NJ Kooyers, JM Colicchio, AB Greenlee… - The American …, 2019 - journals.uchicago.edu
While native populations are often adapted to historical biotic and abiotic conditions at their
home site, populations from other locations in the range may be better adapted to current …

[HTML][HTML] piRNAs Are Associated with Diverse Transgenerational Effects on Gene and Transposon Expression in a Hybrid Dysgenic Syndrome of D. virilis

…, CC Harrison, KD Marr, JM Colicchio… - PLoS …, 2015 - journals.plos.org
Sexual reproduction allows transposable elements (TEs) to proliferate, leading to rapid
divergence between populations and species. A significant outcome of divergence in the TE …

Population responses to a historic drought across the range of the common monkeyflower (Mimulus guttatus)

NJ Kooyers, KA Morioka, JM Colicchio… - American Journal of …, 2021 - Wiley Online Library
PREMISE Due to climate change, more frequent and intense periodic droughts are predicted
to increasingly pose major challenges to the persistence of plant populations. When a …

Gene expression plasticity resulting from parental leaf damage in Mimulus guttatus

JM Colicchio, PJ Monnahan, JK Kelly… - New …, 2015 - Wiley Online Library
Leaf trichome density in M imulus guttatus can be altered by the parental environment. In this
study, we compared global gene expression patterns in progeny of damaged and control …

[HTML][HTML] A tool for rapid, automated characterization of population epigenomics in plants

JM Colicchio, CL Amstutz, N Garcia, KN Prabhu… - Scientific Reports, 2023 - nature.com
Epigenetic variation in plant populations is an important factor in determining phenotype and
adaptation to the environment. However, while advances have been made in the molecular …

[HTML][HTML] Parental experience modifies the Mimulus methylome

JM Colicchio, JK Kelly, LC Hileman - BMC genomics, 2018 - Springer
Background Transgenerational plasticity occurs when the environmental experience of an
organism modifies the growth and development of its progeny. Leaf damage in Mimulus …

Adaptive and nonadaptive causes of heterogeneity in genetic differentiation across the Mimulus guttatus genome

JM Colicchio, LN Hamm, HE Verdonk… - Molecular …, 2021 - Wiley Online Library
Genetic diversity becomes structured among populations over time due to genetic drift and
divergent selection. Although population structure is often treated as a uniform underlying …