[HTML][HTML] Genetic architecture of artemisinin-resistant Plasmodium falciparum
We report a large multicenter genome-wide association study of Plasmodium falciparum
resistance to artemisinin, the frontline antimalarial drug. Across 15 locations in Southeast Asia, …
resistance to artemisinin, the frontline antimalarial drug. Across 15 locations in Southeast Asia, …
Multiple populations of artemisinin-resistant Plasmodium falciparum in Cambodia
We describe an analysis of genome variation in 825 P. falciparum samples from Asia and
Africa that identifies an unusual pattern of parasite population structure at the epicenter of …
Africa that identifies an unusual pattern of parasite population structure at the epicenter of …
[HTML][HTML] Analysis of Plasmodium falciparum diversity in natural infections by deep sequencing
Malaria elimination strategies require surveillance of the parasite population for genetic
changes that demand a public health response, such as new forms of drug resistance 1 , 2 . …
changes that demand a public health response, such as new forms of drug resistance 1 , 2 . …
[HTML][HTML] Genetic markers associated with dihydroartemisinin–piperaquine failure in Plasmodium falciparum malaria in Cambodia: a genotype–phenotype association …
…, D Dek, RD Pearson, J Almagro-Garcia… - The Lancet Infectious …, 2017 - thelancet.com
Background As the prevalence of artemisinin-resistant Plasmodium falciparum malaria
increases in the Greater Mekong subregion, emerging resistance to partner drugs in artemisinin …
increases in the Greater Mekong subregion, emerging resistance to partner drugs in artemisinin …
[HTML][HTML] Origins of the current outbreak of multidrug-resistant malaria in southeast Asia: a retrospective genetic study
R Amato, RD Pearson, J Almagro-Garcia… - The Lancet Infectious …, 2018 - thelancet.com
Background Antimalarial resistance is rapidly spreading across parts of southeast Asia where
dihydroartemisinin–piperaquine is used as first-line treatment for Plasmodium falciparum …
dihydroartemisinin–piperaquine is used as first-line treatment for Plasmodium falciparum …
Genomic analysis of local variation and recent evolution in Plasmodium vivax
The widespread distribution and relapsing nature of Plasmodium vivax infection present
major challenges for the elimination of malaria. To characterize the genetic diversity of this …
major challenges for the elimination of malaria. To characterize the genetic diversity of this …
treespace: Statistical exploration of landscapes of phylogenetic trees
…, M Kendall, J Almagro‐Garcia… - Molecular ecology …, 2017 - Wiley Online Library
The increasing availability of large genomic data sets as well as the advent of Bayesian
phylogenetics facilitates the investigation of phylogenetic incongruence, which can result in the …
phylogenetics facilitates the investigation of phylogenetic incongruence, which can result in the …
[HTML][HTML] An open dataset of Plasmodium falciparum genome variation in 7,000 worldwide samples
A Ahouidi, M Ali, J Almagro-Garcia… - Wellcome Open …, 2021 - ncbi.nlm.nih.gov
A major obstacle to malaria elimination is the great capacity of the parasite and vector
populations to evolve in response to malaria control interventions. The widespread use of …
populations to evolve in response to malaria control interventions. The widespread use of …
Genetic surveillance in the Greater Mekong subregion and South Asia to support malaria control and elimination
Background: National Malaria Control Programmes (NMCPs) currently make limited use of
parasite genetic data. We have developed GenRe-Mekong, a platform for genetic …
parasite genetic data. We have developed GenRe-Mekong, a platform for genetic …
[HTML][HTML] Pf7: an open dataset of Plasmodium falciparum genome variation in 20,000 worldwide samples
…, A Ahouidi, M Ali, J Almagro-Garcia… - Wellcome open …, 2023 - ncbi.nlm.nih.gov
We describe the MalariaGEN Pf7 data resource, the seventh release of Plasmodium falciparum
genome variation data from the MalariaGEN network. It comprises over 20,000 samples …
genome variation data from the MalariaGEN network. It comprises over 20,000 samples …