Genomic landscape of lung adenocarcinoma in East Asians

…, LB Amer, FG Sherbaf, CQ Tan, JJS Alvarez… - Nature …, 2020 - nature.com
Lung cancer is the world’s leading cause of cancer death and shows strong ancestry
disparities. By sequencing and assembling a large genomic and transcriptomic dataset of lung …

[PDF][PDF] Dynamic phenotypic heterogeneity and the evolution of multiple RNA subtypes in hepatocellular carcinoma: the PLANET study

…, S Ma, SC Chew, KP Chua, JJS Alvarez… - National science …, 2022 - academic.oup.com
Intra-tumor heterogeneity (ITH) is a key challenge in cancer treatment, but previous studies
have focused mainly on the genomic alterations without exploring phenotypic (transcriptomic …

[PDF][PDF] Obtaining spatially resolved tumor purity maps using deep multiple instance learning in a pan-cancer study

…, E Revkov, A James, SY Heng, AN Kaya, JJS Alvarez… - Patterns, 2022 - cell.com
Tumor purity is the percentage of cancer cells within a tissue section. Pathologists estimate
tumor purity to select samples for genomic analysis by manually reading hematoxylin-eosin (…

Passage adaptation correlates with the reduced efficacy of the influenza vaccine

H Chen, JJS Alvarez, SH Ng… - Clinical Infectious …, 2019 - academic.oup.com
Background As a dominant seasonal influenza virus, H3N2 virus rapidly evolves in humans
and is a constant threat to public health. Despite sustained research efforts, the efficacy of …

PSiTE: a phylogeny guided simulator for tumor evolution

H Yang, B Lu, LH Lai, AH Lim, JJS Alvarez… - …, 2019 - academic.oup.com
Simulating realistic clonal dynamics of tumors is an important topic in cancer genomics.
Here, we present Phylogeny guided Simulator for Tumor Evolution, a tool that can simulate …

[HTML][HTML] MADE: A computational tool for predicting vaccine effectiveness for the influenza A (H3N2) virus adapted to embryonated eggs

H Chen, J Wang, Y Liu, IQE Ling, CC Shih, D Wu, Z Fu… - Vaccines, 2022 - mdpi.com
… We also would like to thank Ai Shan Lee for helpful technical support and Jacob Josiah
Santiago Alvarez for the help with the English presentation of the manuscript. We also …

[BOOK][B] Trajectories of Empire: Transhispanic Reflections on the African Diaspora

…, A Lugo-Ortiz, LH Costigan, A Alberto, E Jacob… - 2022 - books.google.com
Trajectories of Empire extends from the beginning of the Iberian expansion of the mid-fifteenth
century, through colonialism and slavery, and into the twentieth and twenty-first centuries …

Building a network of sentinel centres for the care of women in an abortion situation: advances in Latin America and the Caribbean

…, A Messina, LA de Francisco, SS Jacob - BMJ Global …, 2022 - gh.bmj.com
Previous reports have already estimated the overall number of abortions and the number of
unsafe abortions in Latin America. Conversely, there are few reliable data from this region to …

[PDF][PDF] Commencement

JLB Stadium - Genesis, 2010 - swccd.edu
American use has been standardized by an intercollegiate code, which takes the Oxford
costume as a starting point. The bachelor’s gown has long, pointed sleeves, and the master’s …

[PDF][PDF] ANOTHER GRADUATION LOST TO COVID-19

A Rodriguez - scholarworks.utep.edu
What should have been a time to celebrate graduation and start a lifelong career instead
turned into another tradition lost to the COVID-19 pandemic. Hundreds of seniors at UTEP will …