User profiles for Jacquelyn M. Roger
Jacquelyn RogerUniversity of California, San Francisco Verified email at ucsf.edu Cited by 83 |
Transfer RNA genes experience exceptionally elevated mutation rates
… and M. mulatta, and 15% of human tRNA loci have a low-frequency SNP (Fig. 1). Furthermore,
virtually all active tRNA loci differ at this nucleotide between human and M… We obtained M. …
virtually all active tRNA loci differ at this nucleotide between human and M… We obtained M. …
The case for using mapped exonic non-duplicate reads when reporting RNA-sequencing depth: examples from pediatric cancer datasets
Background The reproducibility of gene expression measured by RNA sequencing (RNA-Seq)
is dependent on the sequencing depth. While unmapped or non-exonic reads do not …
is dependent on the sequencing depth. While unmapped or non-exonic reads do not …
Retrospective analysis of wildfire smoke exposure and birth weight outcomes in the San Francisco Bay Area of California
… wildfire PM 2.5 exceeded 5 μg m −3 to capture exposure … m −3 ( ß = 0.009; 95% CI: 0.001,
0.017) in the second trimester. The Beta coefficient derived from linear regression for 1 μg m −…
0.017) in the second trimester. The Beta coefficient derived from linear regression for 1 μg m −…
[HTML][HTML] Leveraging electronic health records to identify risk factors for recurrent pregnancy loss across two medical centers: a case-control study
Recurrent pregnancy loss (RPL), defined as 2 or more pregnancy losses, affects 5–6% of
ever-pregnant individuals. Approximately half of these cases have no identifiable explanation. …
ever-pregnant individuals. Approximately half of these cases have no identifiable explanation. …
[HTML][HTML] Leveraging electronic health records and knowledge networks for Alzheimer's disease prediction and sex-specific biological insights
Identification of Alzheimer’s disease (AD) onset risk can facilitate interventions before irreversible
disease progression. We demonstrate that electronic health records from the University …
disease progression. We demonstrate that electronic health records from the University …
Data-driven longitudinal characterization of neonatal health and morbidity
Although prematurity is the single largest cause of death in children under 5 years of age,
the current definition of prematurity, based on gestational age, lacks the precision needed for …
the current definition of prematurity, based on gestational age, lacks the precision needed for …
Bottom-up drivers of future fire regimes in western boreal North America
Forest characteristics, structure, and dynamics within the North American boreal region are
heavily influenced by wildfire intensity, severity, and frequency. Increasing temperatures are …
heavily influenced by wildfire intensity, severity, and frequency. Increasing temperatures are …
[HTML][HTML] Translational bioinformatics to enable precision medicine for all: elevating equity across molecular, clinical, and digital realms
Objectives: Over the past few years, challenges from the pandemic have led to an explosion
of data sharing and algorithmic development efforts in the areas of molecular measurements…
of data sharing and algorithmic development efforts in the areas of molecular measurements…
Fire as a fundamental ecological process: Research advances and frontiers
Fire is a powerful ecological and evolutionary force that regulates organismal traits, population
sizes, species interactions, community composition, carbon and nutrient cycling and …
sizes, species interactions, community composition, carbon and nutrient cycling and …
Framework for determining accuracy of RNA sequencing data for gene expression profiling of single samples
Background The accuracy of gene expression as measured by RNA sequencing (RNA-Seq)
is dependent on the amount of sequencing performed. However, some types of reads are …
is dependent on the amount of sequencing performed. However, some types of reads are …