Stop codon context influences genome-wide stimulation of termination codon readthrough by aminoglycosides
JR Wangen, R Green - Elife, 2020 - elifesciences.org
Stop codon readthrough (SCR) occurs when the ribosome miscodes at a stop codon. Such
readthrough events can be therapeutically desirable when a premature termination codon (…
readthrough events can be therapeutically desirable when a premature termination codon (…
Nuclease-mediated depletion biases in ribosome footprint profiling libraries
Ribosome footprint profiling is a high-throughput sequencing–based technique that provides
detailed and global views of translation in living cells. An essential part of this technology is …
detailed and global views of translation in living cells. An essential part of this technology is …
Assessment of erythroid dysplasia by “difference from normal” in routine clinical flow cytometry workup
…, AJ Menssen, JR Wangen… - Cytometry Part B …, 2015 - Wiley Online Library
Introduction While multidimensional flow cytometry (MDF) has great utility in diagnostic workups
of patients with suspected myelodysplastic syndromes (MDS), only the myeloid lineage …
of patients with suspected myelodysplastic syndromes (MDS), only the myeloid lineage …
Investigation of Translation Termination and Stop Codon Readthrough using Ribosome Profiling
JR Wangen - 2019 - jscholarship.library.jhu.edu
To successfully conclude protein synthesis, the ribosome must accurately terminate translation
upon reaching the termination codon at the end of a coding sequence. Failure to do so …
upon reaching the termination codon at the end of a coding sequence. Failure to do so …
Assessment of normal erythropoiesis by flow cytometry: important considerations for specimen preparation
JR Wangen, L Eidenschink Brodersen… - … journal of laboratory …, 2014 - Wiley Online Library
Introduction The extension of quantitative flow cytometric studies to the erythroid lineage in
patients with suspected myelodysplastic syndrome has prompted a reassessment of cell …
patients with suspected myelodysplastic syndrome has prompted a reassessment of cell …
[HTML][HTML] Finding sense in the context
KM Keeling, DM Bedwell - Elife, 2020 - elifesciences.org
… First, Wangen and Green used ribosomal profiling to examine translation in human cells
treated with the aminoglycoside G418. Cells that were exposed to G418 had fewer ribosomes …
treated with the aminoglycoside G418. Cells that were exposed to G418 had fewer ribosomes …
[PDF][PDF] Dynamic regulation of a ribosome rescue pathway in erythroid cells and platelets
Protein synthesis continues in platelets and maturing reticulocytes, although these blood
cells lack nuclei and do not make new mRNA or ribosomes. Here, we analyze translation in …
cells lack nuclei and do not make new mRNA or ribosomes. Here, we analyze translation in …
[HTML][HTML] A small molecule that induces translational readthrough of CFTR nonsense mutations by eRF1 depletion
…, E Wong, V Mutyam, Y Li, J Chen, J Wangen… - Nature …, 2021 - nature.com
Premature termination codons (PTCs) prevent translation of a full-length protein and trigger
nonsense-mediated mRNA decay (NMD). Nonsense suppression (also termed readthrough) …
nonsense-mediated mRNA decay (NMD). Nonsense suppression (also termed readthrough) …
[PDF][PDF] Bi-allelic genetic variants in the translational GTPases GTPBP1 and GTPBP2 cause a distinct identical neurodevelopmental syndrome
V Salpietro, R Maroofian, MS Zaki, J Wangen… - The American Journal of …, 2024 - cell.com
The homologous genes GTPBP1 and GTPBP2 encode GTP-binding proteins 1 and 2,
which are involved in ribosomal homeostasis. Pathogenic variants in GTPBP2 were recently …
which are involved in ribosomal homeostasis. Pathogenic variants in GTPBP2 were recently …
[HTML][HTML] Equitable implementation of lung cancer screening: avoiding its potential to mirror existing inequities among people who use tobacco
Purpose Lung cancer is the leading cause of cancer death, but the advent of lung cancer
screening using low-dose computed tomography offers a tremendous opportunity to improve …
screening using low-dose computed tomography offers a tremendous opportunity to improve …