[HTML][HTML] Cropping practices manipulate abundance patterns of root and soil microbiome members paving the way to smart farming
…, RA Wittwer, S Banerjee, JC Walser… - Microbiome, 2018 - Springer
Background Harnessing beneficial microbes presents a promising strategy to optimize plant
growth and agricultural sustainability. Little is known to which extent and how specifically …
growth and agricultural sustainability. Little is known to which extent and how specifically …
Choice of capture and extraction methods affect detection of freshwater biodiversity from environmental DNA
Environmental DNA (eDNA) is used to detect biodiversity by the capture, extraction, and
identification of DNA shed to the environment. However, eDNA capture and extraction protocols …
identification of DNA shed to the environment. However, eDNA capture and extraction protocols …
[HTML][HTML] Environmental DNA reveals that rivers are conveyer belts of biodiversity information
DNA sampled from the environment (eDNA) is a useful way to uncover biodiversity patterns.
By combining a conceptual model and empirical data, we test whether eDNA transported in …
By combining a conceptual model and empirical data, we test whether eDNA transported in …
[HTML][HTML] Rescue of fructose-induced metabolic syndrome by antibiotics or faecal transplantation in a rat model of obesity
A fructose-rich diet can induce metabolic syndrome, a combination of health disorders that
increases the risk of diabetes and cardiovascular diseases. Diet is also known to alter the …
increases the risk of diabetes and cardiovascular diseases. Diet is also known to alter the …
[HTML][HTML] Deciphering composition and function of the root microbiome of a legume plant
…, MGA van der Heijden, V Roussely-Provent, JC Walser… - Microbiome, 2017 - Springer
Background Diverse assemblages of microbes colonize plant roots and collectively function
as a microbiome. Earlier work has characterized the root microbiomes of numerous plant …
as a microbiome. Earlier work has characterized the root microbiomes of numerous plant …
Molecular evidence for limited dispersal of vegetative propagules in the epiphytic lichen Lobaria pulmonaria
JC Walser - American Journal of Botany, 2004 - Wiley Online Library
Propagation, whether sexual or asexual, is a fundamental step in the life cycle of every
organism. In lichenized fungi, a great variety of vegetative propagules have evolved in order for …
organism. In lichenized fungi, a great variety of vegetative propagules have evolved in order for …
Phylogenetic clustering of small low nucleic acid-content bacteria across diverse freshwater ecosystems
…, T Langenegger, K Beck, JC Walser… - The ISME …, 2018 - academic.oup.com
Here we used flow cytometry (FCM) and filtration paired with amplicon sequencing to determine
the abundance and composition of small low nucleic acid (LNA)-content bacteria in a …
the abundance and composition of small low nucleic acid (LNA)-content bacteria in a …
Sedimentary DNA reveals cyanobacterial community diversity over 200 years in two perialpine lakes
ME Monchamp, JC Walser, F Pomati… - Applied and …, 2016 - Am Soc Microbiol
We reconstructed cyanobacterial community structure and phylogeny using DNA that was
isolated from layers of stratified sediments spanning 200 years of lake history in the perialpine …
isolated from layers of stratified sediments spanning 200 years of lake history in the perialpine …
[HTML][HTML] Estimating bacterial diversity for ecological studies: methods, metrics, and assumptions
J Birtel, JC Walser, S Pichon, H Bürgmann… - PloS one, 2015 - journals.plos.org
Methods to estimate microbial diversity have developed rapidly in an effort to understand
the distribution and diversity of microorganisms in natural environments. For bacterial …
the distribution and diversity of microorganisms in natural environments. For bacterial …
Comparing the performance of 12S mitochondrial primers for fish environmental DNA across ecosystems
…, F Altermatt, S Brosse, JC Walser… - Environmental …, 2021 - Wiley Online Library
Through the development of environmental DNA (eDNA) metabarcoding, in situ monitoring
of organisms is becoming easier and promises a revolution in our approaches to detect …
of organisms is becoming easier and promises a revolution in our approaches to detect …