Single-cell transcriptomics reveals bimodality in expression and splicing in immune cells
…, R Satija, X Adiconis, RS Gertner, JT Gaublomme… - Nature, 2013 - nature.com
Recent molecular studies have shown that, even when derived from a seemingly homogenous
population, individual cells can exhibit substantial differences in gene expression, protein …
population, individual cells can exhibit substantial differences in gene expression, protein …
Single-cell RNA-seq reveals dynamic paracrine control of cellular variation
…, D Gennert, D Lu, P Chen, RS Gertner, JT Gaublomme… - Nature, 2014 - nature.com
High-throughput single-cell transcriptomics offers an unbiased approach for understanding
the extent, basis and function of gene expression variation between seemingly identical cells…
the extent, basis and function of gene expression variation between seemingly identical cells…
A roadmap for the human gut cell atlas
…, LA Coburn, JT Gaublomme… - Nature Reviews …, 2023 - nature.com
The number of studies investigating the human gastrointestinal tract using various single-cell
profiling methods has increased substantially in the past few years. Although this increase …
profiling methods has increased substantially in the past few years. Although this increase …
Dynamic regulatory network controlling TH17 cell differentiation
Despite their importance, the molecular circuits that control the differentiation of naive T
cells remain largely unknown. Recent studies that reconstructed regulatory networks in …
cells remain largely unknown. Recent studies that reconstructed regulatory networks in …
[HTML][HTML] Single-cell genomics unveils critical regulators of Th17 cell pathogenicity
Extensive cellular heterogeneity exists within specific immune-cell subtypes classified as a
single lineage, but its molecular underpinnings are rarely characterized at a genomic scale. …
single lineage, but its molecular underpinnings are rarely characterized at a genomic scale. …
Nanowire-mediated delivery enables functional interrogation of primary immune cells: application to the analysis of chronic lymphocytic leukemia
A circuit level understanding of immune cells and hematological cancers has been severely
impeded by a lack of techniques that enable intracellular perturbation without significantly …
impeded by a lack of techniques that enable intracellular perturbation without significantly …
[HTML][HTML] Nuclei multiplexing with barcoded antibodies for single-nucleus genomics
JT Gaublomme, B Li, C McCabe, A Knecht… - Nature …, 2019 - nature.com
Single-nucleus RNA-seq (snRNA-seq) enables the interrogation of cellular states in complex
tissues that are challenging to dissociate or are frozen, and opens the way to human …
tissues that are challenging to dissociate or are frozen, and opens the way to human …
Probing enzymatic activity inside living cells using a nanowire–cell “sandwich” assay
Developing a detailed understanding of enzyme function in the context of an intracellular
signal transduction pathway requires minimally invasive methods for probing enzyme activity in …
signal transduction pathway requires minimally invasive methods for probing enzyme activity in …
Somatic mutation as a mechanism of Wnt/β-catenin pathway activation in CLL
…, M Lawrence, R Ding, JT Gaublomme… - Blood, The Journal …, 2014 - ashpublications.org
One major goal of cancer genome sequencing is to identify key genes and pathways that
drive tumor pathogenesis. Although many studies have identified candidate driver genes …
drive tumor pathogenesis. Although many studies have identified candidate driver genes …
[HTML][HTML] Identification and characterization of latency-associated peptide-expressing γδ T cells
…, N Pinheiro-Rosa, RP Oliveira, JT Gaublomme… - Nature …, 2015 - nature.com
γδ T cells are a subset of lymphocytes specialized in protecting the host against pathogens
and tumours. Here we describe a subset of regulatory γδ T cells that express the latency-…
and tumours. Here we describe a subset of regulatory γδ T cells that express the latency-…