[HTML][HTML] Crossover interference and sex-specific genetic maps shape identical by descent sharing in close relatives
M Caballero, DN Seidman, Y Qiao, J Sannerud… - PLoS …, 2019 - journals.plos.org
Simulations of close relatives and identical by descent (IBD) segments are common in
genetic studies, yet most past efforts have utilized sex averaged genetic maps and ignored …
genetic studies, yet most past efforts have utilized sex averaged genetic maps and ignored …
Achieving diverse and monoallelic olfactory receptor selection through dual-objective optimization design
Multiple-objective optimization is common in biological systems. In the mammalian olfactory
system, each sensory neuron stochastically expresses only one out of up to thousands of …
system, each sensory neuron stochastically expresses only one out of up to thousands of …
[PDF][PDF] Distinguishing pedigree relationships via multi-way identity by descent sharing and sex-specific genetic maps
Y Qiao, JG Sannerud, S Basu-Roy, C Hayward… - The American Journal of …, 2021 - cell.com
The proportion of samples with one or more close relatives in a genetic dataset increases
rapidly with sample size, necessitating relatedness modeling and enabling pedigree-based …
rapidly with sample size, necessitating relatedness modeling and enabling pedigree-based …
Distinguishing pedigree relationships using multi-way identical by descent sharing and sex-specific genetic maps
Y Qiao, J Sannerud, S Basu-Roy, C Hayward… - BioRxiv, 2019 - biorxiv.org
The proportion of samples with one or more close relatives in a genetic dataset increases
rapidly with sample size, necessitating relatedness modeling and enabling pedigree-based …
rapidly with sample size, necessitating relatedness modeling and enabling pedigree-based …
Sex and the X: Developing Sex-Specific Pedigree Inference and Evaluating X Chromosome Identity by Descent
J Sannerud - 2023 - search.proquest.com
Large genomic datasets abound with unreported relatives, making them a prime candidate
for identifying latent pedigree structures. However, the most commonly applied methods for …
for identifying latent pedigree structures. However, the most commonly applied methods for …
Molecular Cooperativity Governs Diverse and Monoallelic Olfactory Receptor Expression
Multiple-objective optimization is common in biological systems. In the mammalian olfactory
system, each sensory neuron stochastically expresses only one out of up to thousands of …
system, each sensory neuron stochastically expresses only one out of up to thousands of …
[HTML][HTML] PNAS PLUS
AH Motagamwala, JA Dumesic - PNAS, 2016 - ncbi.nlm.nih.gov
The design of active and selective catalysts is essential for a wide range of industrial
applications and societal issues. A fundamental approach is to identify the key elementary steps …
applications and societal issues. A fundamental approach is to identify the key elementary steps …
Relationship inference and ancestral genome reconstruction using identical by descent sharing among relatives
Y Qiao - 2021 - search.proquest.com
The fraction of relatives in large genetic databases is continuously increasing, making it
more vital to uncover the relationships among samples for further downstream analysis. …
more vital to uncover the relationships among samples for further downstream analysis. …
Probing Underexplored Axes of Variation in Human DNA Replication Timing
D Massey - 2022 - search.proquest.com
Faithful replication of the DNA is critical for cell proliferation and genome stability. In eukaryotes,
initiation and progression of DNA replication is highly organized in both space and time. …
initiation and progression of DNA replication is highly organized in both space and time. …
[PDF][PDF] Rapid, phase-free detection of long identity-by-descent segments enables effective relationship classification
DN Seidman, SA Shenoy, M Kim, R Babu… - The American Journal of …, 2020 - cell.com
… We thank Ying Qiao and Jens Sannerud for help in testing, and the anonymous reviewers
for suggested analyses. This work was supported by NIH grant R35 GM133805, an Alfred P. …
for suggested analyses. This work was supported by NIH grant R35 GM133805, an Alfred P. …