Mammalian mitochondrial nucleoids: organizing an independently minded genome

IJ Holt, J He, CC Mao, JD Boyd-Kirkup, P Martinsson… - Mitochondrion, 2007 - Elsevier
Mitochondrial DNA is arranged in nucleoprotein complexes, or nucleoids. Nucleoid proteins
include not only factors involved in replication and transcription but also structural proteins …

[HTML][HTML] The Fc-mediated effector functions of a potent SARS-CoV-2 neutralizing antibody, SC31, isolated from an early convalescent COVID-19 patient, are essential …

…, D Wang, JD Boyd-Kirkup, S Guan, D Thakkar… - PLoS …, 2021 - journals.plos.org
Although SARS-CoV-2-neutralizing antibodies are promising therapeutics against COVID-19,
little is known about their mechanism(s) of action or effective dosing windows. We report …

The strand-biased mitochondrial DNA methylome and its regulation by DNMT3A

X Dou, JD Boyd-Kirkup, J McDermott, X Zhang… - Genome …, 2019 - genome.cshlp.org
How individual genes are regulated from a mitochondrial polycistronic transcript to have
variable expression remains an enigma. Here, through bisulfite sequencing and strand-specific …

[HTML][HTML] Rationally targeted anti-VISTA antibody that blockades the C-C'loop region can reverse VISTA immune suppression and remodel the immune …

…, PJ Ingram, JD Boyd-Kirkup - … for Immunotherapy of …, 2022 - ncbi.nlm.nih.gov
Original research: Rationally targeted anti-VISTA antibody that blockades the CC’ loop region
can reverse VISTA immune suppression and remodel the immune microenvironment to …

Epigenomics and the regulation of aging

JD Boyd-Kirkup, CD Green, G Wu, D Wang… - Epigenomics, 2013 - Future Medicine
It is tempting to assume that a gradual accumulation of damage ‘causes’ an organism to age,
but other biological processes present during the lifespan, whether ‘programmed’ or ‘…

Stress‐associated H 3 K 4 methylation accumulates during postnatal development and aging of rhesus macaque brain

Y Han, D Han, Z Yan, JD BoydKirkup, CD Green… - Aging cell, 2012 - Wiley Online Library
Epigenetic modifications are critical determinants of cellular and developmental states.
Epigenetic changes, such as decreased H 3 K 27me3 histone methylation on insulin/ IGF 1 genes…

10D1F, an anti-HER3 antibody that uniquely blocks the receptor heterodimerization interface, potently inhibits tumor growth across a broad panel of tumor models

…, KH Paszkiewicz, PJ Ingram, JD Boyd-Kirkup - Molecular Cancer …, 2020 - AACR
… JD Boyd-Kirkup is the chief scientific officer at and has ownership interest (including patents)
in Hummingbird Bioscience. No potential conflicts of interest were disclosed by the other …

HMBD002, a novel neutralizing antibody targeting a specific epitope on the co-inhibitory immune checkpoint receptor VISTA, displays potent anti-tumor effects in pre …

PJ Ingram, D Thakkar, JD Boyd-Kirkup - Cancer Research, 2017 - AACR
… Ingram, Dipti Thakkar, Jerome D. Boyd-Kirkup. HMBD002, a novel neutralizing antibody
targeting a specific epitope on the co-inhibitory immune checkpoint receptor VISTA, displays …

Single-cell-level spatial gene expression in the embryonic neural differentiation niche

…, X Yu, N Sun, N Qiao, Y Cao, JD Boyd-Kirkup… - Genome …, 2015 - genome.cshlp.org
With the rapidly increasing availability of high-throughput in situ hybridization images, how
to effectively analyze these images at high resolution for global patterns and testable …

Integrative immune profiling of syngeneic tumor models provides predictive immune signatures for treatment response with HMBD002, a novel anti-VISTA neutralizing …

JD Boyd-Kirkup, D Thakkar, K Paszkiewicz, PJ Ingram - Cancer Research, 2018 - AACR
Myeloid-derived suppressor cells (MDSCs) are a group of immature myeloid cells with potent
immune suppressive activity. Accumulation of pathologically activated MDSCs within the …