[HTML][HTML] A multi-omics investigation of the composition and function of extracellular vesicles along the temporal trajectory of COVID-19

…, WJ Cao, MJ Zhou, L Shi, GH Chua, B Li, J Cao… - Nature …, 2021 - nature.com
Exosomes represent a subtype of extracellular vesicle that is released through retrograde
transport and fusion of multivesicular bodies with the plasma membrane 1 . Although no …

LncBook: a curated knowledgebase of human long non-coding RNAs

L Ma, J Cao, L Liu, Q Du, Z Li, D Zou… - Nucleic acids …, 2019 - academic.oup.com
Long non-coding RNAs (lncRNAs) have significant functions in a wide range of important
biological processes. Although the number of known human lncRNAs has dramatically …

Integrated gut virome and bacteriome dynamics in COVID-19 patients

J Cao, C Wang, Y Zhang, G Lei, K Xu, N Zhao, J Lu… - Gut …, 2021 - Taylor & Francis
SARS-CoV-2 is the cause of the current global pandemic of COVID-19; this virus infects
multiple organs, such as the lungs and gastrointestinal tract. The microbiome in these organs, …

[HTML][HTML] Short-and long-read metagenomics expand individualized structural variations in gut microbiomes

L Chen, N Zhao, J Cao, X Liu, J Xu, Y Ma, Y Yu… - Nature …, 2022 - nature.com
In-depth profiling of genetic variations in the gut microbiome is highly desired for understanding
its functionality and impacts on host health and disease. Here, by harnessing the long …

Characterization and identification of long non-coding RNAs based on feature relationship

G Wang, H Yin, B Li, C Yu, F Wang, X Xu, J Cao… - …, 2019 - academic.oup.com
Motivation The significance of long non-coding RNAs (lncRNAs) in many biological
processes and diseases has gained intense interests over the past several years. However, …

Balance transmission mechanism in underwater acoustic sensor networks

J Cao, J Dou, S Dong - International Journal of Distributed …, 2015 - journals.sagepub.com
With the rapid development of underwater acoustic modem technology, underwater
acoustic sensor networks (UWASNs) have more applications in long-term monitoring of the …

Targeting RNA with next‐and third‐generation sequencing improves pathogen identification in clinical samples

N Zhao, J Cao, J Xu, B Liu, B Liu, D Chen… - Advanced …, 2021 - Wiley Online Library
Fast and accurate identification of microbial pathogens is critical for the proper treatment of
infections. Traditional culture‐based diagnosis in clinics is increasingly supplemented by …

ICG: a wiki-driven knowledgebase of internal control genes for RT-qPCR normalization

J Sang, Z Wang, M Li, J Cao, G Niu, L Xia… - Nucleic Acids …, 2018 - academic.oup.com
Real-time quantitative PCR (RT-qPCR) has become a widely used method for accurate
expression profiling of targeted mRNA and ncRNA. Selection of appropriate internal control …

[HTML][HTML] Disturbed gut virome with potent interferonogenic property in systemic lupus erythematosus

B Chen, J Cao, W Liu, Y Zhang, Y Liu, M Wang, F Xiao… - Science bulletin, 2023 - Elsevier
… Beidi Chen and Jiabao Cao performed the bioinformatic and statistical analyses. Fei Xiao …
Jiabao Cao is a full-time postdoctoral fellow at the Institute of Microbiology, Chinese Academy …

Editome Disease Knowledgebase (EDK): a curated knowledgebase of editome-disease associations in human

…, Y Zhang, J Sang, L Xia, M Li, L Liu, J Cao… - Nucleic Acids …, 2019 - academic.oup.com
RNA editing, as an essential co-/post-transcriptional RNA modification type, plays critical
roles in many biological processes and involves with a variety of human diseases. Although …