User profiles for Jirasak Wong-ekkabut
Assoc.Prof.Dr. Jirasak Wong-ekkabutDepartment of Physics, Faculty of Science, Kasetsart University Verified email at ku.ac.th Cited by 2626 |
[HTML][HTML] Effect of lipid peroxidation on the properties of lipid bilayers: a molecular dynamics study
J Wong-Ekkabut, Z Xu, W Triampo, IM Tang… - Biophysical journal, 2007 - cell.com
Lipid peroxidation plays an important role in cell membrane damage. We investigated the
effect of lipid peroxidation on the properties of 1-palmitoyl-2-linoleoyl-sn-glycero-3-…
effect of lipid peroxidation on the properties of 1-palmitoyl-2-linoleoyl-sn-glycero-3-…
Computer simulation study of fullerene translocation through lipid membranes
J Wong-Ekkabut, S Baoukina, W Triampo… - Nature …, 2008 - nature.com
Recent toxicology studies suggest that nanosized aggregates of fullerene molecules can
enter cells and alter their functions, and also cross the blood–brain barrier. However, the …
enter cells and alter their functions, and also cross the blood–brain barrier. However, the …
The hydrophobic effect and its role in cold denaturation
The hydrophobic effect is considered the main driving force for protein folding and plays an
important role in the stability of those biomolecules. Cold denaturation, where the native state …
important role in the stability of those biomolecules. Cold denaturation, where the native state …
[HTML][HTML] The good, the bad and the user in soft matter simulations
J Wong-Ekkabut, M Karttunen - Biochimica et Biophysica Acta (BBA) …, 2016 - Elsevier
Molecular dynamics (MD) simulations have become popular in materials science, biochemistry,
biophysics and several other fields. Improvements in computational resources, in quality …
biophysics and several other fields. Improvements in computational resources, in quality …
Bilayer deformation, pores, and micellation induced by oxidized lipids
…, M Karttunen, J Wong-Ekkabut - The journal of …, 2015 - ACS Publications
The influence of different oxidized lipids on lipid bilayers was investigated with 16 individual
1 μs atomistic molecular dynamics (MD) simulations. Binary mixtures of lipid bilayers of 1-…
1 μs atomistic molecular dynamics (MD) simulations. Binary mixtures of lipid bilayers of 1-…
Molecular dynamics simulations of the interaction of beta cyclodextrin with a lipid bilayer
…, T Rungrotmongkol, J Wong-Ekkabut… - Journal of chemical …, 2015 - ACS Publications
Beta cyclodextrin (βCD) is well-known as a potent drug carrier improving drug solubility,
stability, and bioavailability. The water layer adjacent to the membrane surface and lipophilic …
stability, and bioavailability. The water layer adjacent to the membrane surface and lipophilic …
Static charges cannot drive a continuous flow of water molecules through a carbon nanotube
J Wong-Ekkabut, MS Miettinen, C Dias… - Nature …, 2010 - nature.com
Figure 1| Cumulative fiux of water molecules as a function of time for two different MD
simulations of the system shown in the inset. The inset shows a carbon nanotube connecting two …
simulations of the system shown in the inset. The inset shows a carbon nanotube connecting two …
Lipid monolayer disruption caused by aggregated carbon nanoparticles
Carbon nanoparticles (CNP) have significant impact on the Pulmonary Surfactant (PS), the
first biological barrier in the respiratory system. CNPs – abundant in the environment due to …
first biological barrier in the respiratory system. CNPs – abundant in the environment due to …
Assessment of common simulation protocols for simulations of nanopores, membrane proteins, and channels
J Wong-Ekkabut, M Karttunen - Journal of chemical theory and …, 2012 - ACS Publications
Molecular dynamics (MD) simulation has become a common technique to study biological
systems. Transport of small molecules through carbon nanotubes and membrane proteins …
systems. Transport of small molecules through carbon nanotubes and membrane proteins …
[HTML][HTML] The relationship between the morphology and elasticity of natural rubber foam based on the concentration of the chemical blowing agent
S Suethao, S Phongphanphanee, J Wong-Ekkabut… - Polymers, 2021 - mdpi.com
Concentrated natural latex was used to produce a rubber foam that is porous, elastic and
well ventilated. The mechanical properties can be either soft or firm, depending on the …
well ventilated. The mechanical properties can be either soft or firm, depending on the …