User profiles for João A. Paulo
Joao A PauloInstructor in Cell Biology, Harvard Medical School Verified email at hms.harvard.edu Cited by 18360 |
[PDF][PDF] The BioPlex network: a systematic exploration of the human interactome
…, ME Sowa, P De Camilli, JA Paulo… - Cell, 2015 - cell.com
Protein interactions form a network whose structure drives cellular function and whose
organization informs biological inquiry. Using high-throughput affinity-purification mass …
organization informs biological inquiry. Using high-throughput affinity-purification mass …
Autophagy promotes immune evasion of pancreatic cancer by degrading MHC-I
Immune evasion is a major obstacle for cancer treatment. Common mechanisms of evasion
include impaired antigen presentation caused by mutations or loss of heterozygosity of the …
include impaired antigen presentation caused by mutations or loss of heterozygosity of the …
TMTpro reagents: a set of isobaric labeling mass tags enables simultaneous proteome-wide measurements across 16 samples
Isobaric labeling empowers proteome-wide expression measurements simultaneously
across multiple samples. Here an expanded set of 16 isobaric reagents based on an isobutyl-…
across multiple samples. Here an expanded set of 16 isobaric reagents based on an isobutyl-…
Streamlined tandem mass tag (SL-TMT) protocol: an efficient strategy for quantitative (phospho) proteome profiling using tandem mass tag-synchronous precursor …
Mass spectrometry (MS) coupled toisobaric labeling has developed rapidly into a powerful
strategy for high-throughput protein quantification. Sample multiplexing and exceptional …
strategy for high-throughput protein quantification. Sample multiplexing and exceptional …
[HTML][HTML] An ancient, unified mechanism for metformin growth inhibition in C. elegans and cancer
Metformin has utility in cancer prevention and treatment, though the mechanisms for these
effects remain elusive. Through genetic screening in C. elegans, we uncover two metformin …
effects remain elusive. Through genetic screening in C. elegans, we uncover two metformin …
A triple knockout (TKO) proteomics standard for diagnosing ion interference in isobaric labeling experiments
Isobaric labeling is a powerful strategy for quantitative mass spectrometry-based proteomic
investigations. A complication of such analyses has been the co-isolation of multiple analytes …
investigations. A complication of such analyses has been the co-isolation of multiple analytes …
Characterization and optimization of multiplexed quantitative analyses using high-field asymmetric-waveform ion mobility mass spectrometry
…, V Zabrouskov, JJ Dunyach, JA Paulo… - Analytical …, 2019 - ACS Publications
Multiplexed, isobaric tagging methods are powerful techniques to increase throughput,
precision, and accuracy in quantitative proteomics. The dynamic range and accuracy of …
precision, and accuracy in quantitative proteomics. The dynamic range and accuracy of …
Automatic forest fire danger rating calibration: Exploring clustering techniques for regionally customizable fire danger classification
Effective wildfire management begins with fire prevention and the assessment of the local fire
danger. Typical approaches to fire danger classification rely heavily on manual analysis for …
danger. Typical approaches to fire danger classification rely heavily on manual analysis for …
Architecture of the human interactome defines protein communities and disease networks
The physiology of a cell can be viewed as the product of thousands of proteins acting in
concert to shape the cellular response. Coordination is achieved in part through networks of …
concert to shape the cellular response. Coordination is achieved in part through networks of …
[PDF][PDF] The PINK1-PARKIN mitochondrial ubiquitylation pathway drives a program of OPTN/NDP52 recruitment and TBK1 activation to promote mitophagy
Damaged mitochondria are detrimental to cellular homeostasis. One mechanism for
removal of damaged mitochondria involves the PINK1-PARKIN pathway, which poly-ubiquitylates …
removal of damaged mitochondria involves the PINK1-PARKIN pathway, which poly-ubiquitylates …