The AtGenExpress global stress expression data set: protocols, evaluation and model data analysis of UV‐B light, drought and cold stress responses
J Kilian, D Whitehead, J Horak, D Wanke… - The Plant …, 2007 - Wiley Online Library
The tolerance responses of plants to many abiotic stresses are conjectured to be controlled
by complex gene networks. In the frame of the AtGenExpress project a comprehensive …
by complex gene networks. In the frame of the AtGenExpress project a comprehensive …
[HTML][HTML] Phylogenetic and comparative gene expression analysis of barley (Hordeum vulgare) WRKY transcription factor family reveals putatively retained functions …
E Mangelsen, J Kilian, KW Berendzen… - BMC genomics, 2008 - Springer
Background WRKY proteins belong to the WRKY-GCM1 superfamily of zinc finger transcription
factors that have been subject to a large plant-specific diversification. For the cereal crop …
factors that have been subject to a large plant-specific diversification. For the cereal crop …
[PDF][PDF] Transcriptome analysis of high-temperature stress in developing barley caryopses: early stress responses and effects on storage compound biosynthesis
High-temperature stress, like any abiotic stress, impairs the physiology and development of
plants, including the stages of seed setting and ripening. We used the Affymetrix 22K Barley1 …
plants, including the stages of seed setting and ripening. We used the Affymetrix 22K Barley1 …
The Arabidopsis GAGA-binding factor basic pentacysteine6 recruits the polycomb-repressive complex1 component like heterochromatin protein1 to GAGA DNA motifs
…, LH Brand, S Peter, N Simoncello, J Kilian… - Plant …, 2015 - academic.oup.com
Polycomb-repressive complexes (PRCs) play key roles in development by repressing a large
number of genes involved in various functions. Much, however, remains to be discovered …
number of genes involved in various functions. Much, however, remains to be discovered …
Volatiles of two growth‐inhibiting rhizobacteria commonly engage AtWRKY18 function
K Wenke, D Wanke, J Kilian, K Berendzen… - The Plant …, 2012 - Wiley Online Library
Interactions with the (a)biotic environment play key roles in a plant’s fitness and vitality. In
addition to direct surface‐to‐surface contact, volatile chemicals can also affect the physiology …
addition to direct surface‐to‐surface contact, volatile chemicals can also affect the physiology …
Comparing Arabidopsis receptor kinase and receptor protein‐mediated immune signaling reveals BIK1‐dependent differences
…, R Brugman, X Ma, E Krol, A Perraki, J Kilian… - New …, 2019 - Wiley Online Library
Pattern recognition receptors (PRRs) sense microbial patterns and activate innate immunity
against attempted microbial invasions. The leucine‐rich repeat receptor kinases (LRR‐RK) …
against attempted microbial invasions. The leucine‐rich repeat receptor kinases (LRR‐RK) …
[HTML][HTML] PNPase activity determines the efficiency of mRNA 3′‐end processing, the degradation of tRNA and the extent of polyadenylation in chloroplasts
M Walter, J Kilian, J Kudla - The EMBO journal, 2002 - embopress.org
The exoribonuclease polynucleotide phosphorylase (PNPase) has been implicated in mRNA
processing and degradation in bacteria as well as in chloroplasts of higher plants. Here, …
processing and degradation in bacteria as well as in chloroplasts of higher plants. Here, …
[HTML][HTML] Bioinformatic cis-element analyses performed in Arabidopsis and rice disclose bZIP- and MYB-related binding sites as potential AuxRE-coupling elements in …
KW Berendzen, C Weiste, D Wanke, J Kilian, K Harter… - BMC plant biology, 2012 - Springer
Background In higher plants, a diverse array of developmental and growth-related processes
is regulated by the plant hormone auxin. Recent publications have proposed that besides …
is regulated by the plant hormone auxin. Recent publications have proposed that besides …
Cell type-specific transcriptome analysis in the early Arabidopsis thaliana embryo
D Slane, J Kong, KW Berendzen, J Kilian… - …, 2014 - journals.biologists.com
In multicellular organisms, cellular differences in gene activity are a prerequisite for differentiation
and establishment of cell types. In order to study transcriptome profiles, specific cell …
and establishment of cell types. In order to study transcriptome profiles, specific cell …
[HTML][HTML] Plant core environmental stress response genes are systemically coordinated during abiotic stresses
A Hahn, J Kilian, A Mohrholz, F Ladwig… - International Journal of …, 2013 - mdpi.com
Studying plant stress responses is an important issue in a world threatened by global warming.
Unfortunately, comparative analyses are hampered by varying experimental setups. In …
Unfortunately, comparative analyses are hampered by varying experimental setups. In …