User profiles for Johanna F. B. Pagano

Johanna FB Pagano

PhD Student, University of Amsterdam
Verified email at uva.nl
Cited by 243

Expression of distinct maternal and somatic 5.8 S, 18S, and 28S rRNA types during zebrafish development

MD Locati, JFB Pagano, G Girard, WA Ensink… - Rna, 2017 - rnajournal.cshlp.org
There is mounting evidence that the ribosome is not a static translation machinery, but a cell-specific,
adaptive system. Ribosomal variations have mostly been studied at the protein …

Linking maternal and somatic 5S rRNA types with different sequence-specific non-LTR retrotransposons

MD Locati, JFB Pagano, WA Ensink, M Van Olst… - RNA, 2017 - rnajournal.cshlp.org
5S rRNA is a ribosomal core component, transcribed from many gene copies organized in
genomic repeats. Some eukaryotic species have two 5S rRNA types defined by their …

Identifying small RNAs derived from maternal-and somatic-type rRNAs in zebrafish development

MD Locati, JFB Pagano, F Abdullah, WA Ensink… - …, 2018 - cdnsciencepub.com
rRNAs are non-coding RNAs present in all prokaryotes and eukaryotes. In eukaryotes there
are four rRNAs: 18S, 5.8S, 28S, originating from a common precursor (45S), and 5S. We …

[HTML][HTML] Mother-Specific Signature in the Maternal Transcriptome Composition of Mature, Unfertilized Zebrafish Eggs

H Rauwerda, P Wackers, JFB Pagano, M de Jong… - PLoS …, 2016 - journals.plos.org
Maternal mRNA present in mature oocytes plays an important role in the proper development
of the early embryo. As the composition of the maternal transcriptome in general has been …

[HTML][HTML] Transcriptome dynamics in early zebrafish embryogenesis determined by high-resolution time course analysis of 180 successive, individual zebrafish …

H Rauwerda, JFB Pagano, WC de Leeuw, W Ensink… - BMC genomics, 2017 - Springer
Background Recently, much progress has been made in the field of gene-expression in early
embryogenesis. However, the dynamic behaviour of transcriptomes in individual embryos …

Maternal-and somatic-type snoRNA expression and processing in zebrafish development

JFB Pagano, MD Locati, WA Ensink, M van Olst… - BioRxiv, 2019 - biorxiv.org
Small nucleolar RNAs (snoRNAs) are non-coding RNAs that play an important role in the
complex maturation process of ribosomal RNAs (rRNAs). SnoRNAs are categorized in classes, …

An alternative spliceosome defined by distinct snRNAs in early zebrafish embryogenesis

JFB Pagano, RJ Dekker, WA Ensink, M van Olst, A Bos… - BioRxiv, 2019 - biorxiv.org
Splicing removes intronic RNA sequences are removed from pre-mRNA molecules and
enables, by alternative splicing, the generation of multiple unique RNA molecules from a single …

Cellular Factors Involved in Transcriptome Dynamics in Early Zebrafish Embryogenesis

H Rauwerda, JFB Pagano, WC de Leeuw, W Ensink… - bioRxiv, 2022 - biorxiv.org
At gastrulation in the zebrafish embryogenesis, the embryonic genome is switched on to
produce transcripts that are used for the maintenance and development of the embryo. In a …

[HTML][HTML] Transcriptome data on maternal RNA of 24 individual zebrafish eggs from five sibling mothers

JFB Pagano, H Rauwerda, WC de Leeuw, P Wackers… - Data in Brief, 2016 - Elsevier
Maternal mRNA that is present in the mature oocyte plays an important role in the proper
development of the early embryo. To elucidate the role of the maternal transcriptome we …

[PDF][PDF] Maternal-and Somatic-type snoRNA Expression and Processing in ebrafish Development

JFB Pagano, MD Locati, WA Ensink, M van Olst… - Discovery of a dedicated … - pure.uva.nl
Small nucleolar RNAs (snoRNAs) are non-coding RNAs that play an important role in the
complex maturation process of ribosomal RNAs (rRNAs). SnoRNAs are categorized in classes, …