User profiles for John C. Rose

John C Rose

Stanford University
Verified email at stanford.edu
Cited by 653

[HTML][HTML] The evolutionary dynamics of extrachromosomal DNA in human cancers

JT Lange, JC Rose, CY Chen, Y Pichugin, L Xie… - Nature …, 2022 - nature.com
Oncogene amplification on extrachromosomal DNA (ecDNA) is a common event, driving
aggressive tumor growth, drug resistance and shorter survival. Currently, the impact of …

ecDNA hubs drive cooperative intermolecular oncogene expression

…, CV Duffy, K Kraft, J Tang, JA Belk, JC Rose… - Nature, 2021 - nature.com
Extrachromosomal DNA (ecDNA) is prevalent in human cancers and mediates high expression
of oncogenes through gene amplification and altered gene regulation 1 . Gene induction …

HTSanalyzeR: an R/Bioconductor package for integrated network analysis of high-throughput screens

X Wang, C Terfve, JC Rose, F Markowetz - Bioinformatics, 2011 - academic.oup.com
Motivation: High-throughput screens (HTS) by RNAi or small molecules are among the most
promising tools in functional genomics. They enable researchers to observe detailed …

Rapidly inducible Cas9 and DSB-ddPCR to probe editing kinetics

JC Rose, JJ Stephany, WJ Valente, BM Trevillian… - Nature …, 2017 - nature.com
We developed a chemically inducible Cas9 (ciCas9) and a droplet digital PCR assay for
double-strand breaks (DSB-ddPCR) to investigate the kinetics of Cas9-mediated generation …

Mechanisms of resistance to cabazitaxel

GE Duran, YC Wang, EB Francisco, JC Rose… - Molecular cancer …, 2015 - AACR
We studied mechanisms of resistance to the novel taxane cabazitaxel in established cellular
models of taxane resistance. We also developed cabazitaxel-resistant variants from MCF-7 …

[HTML][HTML] Suppression of unwanted CRISPR-Cas9 editing by co-administration of catalytically inactivating truncated guide RNAs

JC Rose, NA Popp, CD Richardson… - Nature …, 2020 - nature.com
CRISPR-Cas9 nucleases are powerful genome engineering tools, but unwanted cleavage
at off-target and previously edited sites remains a major concern. Numerous strategies to …

[PDF][PDF] The hemodynamic alterations produced by a plastic valvular prosthesis for severe aortic insufficiency in man

JC Rose, CA Hufnagel, ED Freis… - The Journal of …, 1954 - Am Soc Clin Investig
Until recently, patients with aortic insufficiency and congestive heart failure have been offered
only the temporary palliation provided by rest, diet, cardiac glycosides, and diuretics. A …

Methodical series model test results

JC Rose, CF Kruppa - 1991 - trid.trb.org
In recent years the number of high-speed craft propelled by surface piercing propellers has
increased substantially. There are now several thousand vessels operating with surface …

Evidence for a humoral regulation of erythropoiesis: Studies on a patient with polycythemia secondary to regional hypoxia

F STOHLMAN JR, CE RATH, JC ROSE - Blood, 1954 - ashpublications.org
Data obtained from a patient with polycythemia secondary to a patent ductus arteriosus with
reverse flow, have been presented. Oxygen saturation and tension of brachial arterial blood …

Comparison of effects of angiotensin and norepinephrine on pulmonary circulation, systemic arteries and veins, and systemic vascular capacity in the dog

JC ROSE, PA KOT, JAYN COHN, ED FREIS… - Circulation, 1962 - Am Heart Assoc
In dog experiments, angiotensin II and norepinephrine were compared in regard to some
components of the generalized pressor response each of these agents produces. It was found …