User profiles for Jordan M. Welker
Jordan M. WelkerPostdoctoral Fellow, NYU Langone Health Verified email at nyulangone.org Cited by 493 |
The tripartite motif coiled-coil is an elongated antiparallel hairpin dimer
…, V Chandrasekaran, JM Welker… - Proceedings of the …, 2014 - National Acad Sciences
Tripartite motif (TRIM) proteins make up a large family of coiled-coil-containing RING E3 ligases
that function in many cellular processes, particularly innate antiviral response pathways. …
that function in many cellular processes, particularly innate antiviral response pathways. …
Efficient targeted integration directed by short homology in zebrafish and mammalian cells
Efficient precision genome engineering requires high frequency and specificity of integration
at the genomic target site. Here, we describe a set of resources to streamline reporter gene …
at the genomic target site. Here, we describe a set of resources to streamline reporter gene …
Expanding the CRISPR toolbox with ErCas12a in zebrafish and human cells
…, Z WareJoncas, C Mann, JM Welker… - The CRISPR …, 2019 - liebertpub.com
CRISPR and CRISPR-Cas effector proteins enable the targeting of DNA double-strand breaks
to defined loci based on a variable length RNA guide specific to each effector. The guide …
to defined loci based on a variable length RNA guide specific to each effector. The guide …
Transcriptional adaptation in Caenorhabditis elegans
Transcriptional adaptation is a recently described phenomenon by which a mutation in one
gene leads to the transcriptional modulation of related genes, termed adapting genes. At the …
gene leads to the transcriptional modulation of related genes, termed adapting genes. At the …
Cre/lox regulated conditional rescue and inactivation with zebrafish UFlip alleles generated by CRISPR-Cas9 targeted integration
The ability to regulate gene activity spatially and temporally is essential to investigate cell-type-specific
gene function during development and in postembryonic processes and disease …
gene function during development and in postembryonic processes and disease …
Parental mutations influence wild-type offspring via transcriptional adaptation
Transgenerational epigenetic inheritance (TEI) is mostly discussed in the context of
physiological or environmental factors. Here, we show intergenerational and transgenerational …
physiological or environmental factors. Here, we show intergenerational and transgenerational …
GeneWeld: efficient targeted integration directed by short homology in zebrafish
Efficient precision genome engineering requires high frequency and specificity of integration
at the genomic target site. Multiple design strategies for zebrafish gene targeting have …
at the genomic target site. Multiple design strategies for zebrafish gene targeting have …
[HTML][HTML] Endogenous zebrafish proneural Cre drivers generated by CRISPR/Cas9 short homology directed targeted integration
We previously reported efficient precision targeted integration of reporter DNA in zebrafish
and human cells using CRISPR/Cas9 and short regions of homology. Here, we apply this …
and human cells using CRISPR/Cas9 and short regions of homology. Here, we apply this …
[HTML][HTML] Partial sequence identity in a 25-nucleotide long element is sufficient for transcriptional adaptation in the Caenorhabditis elegans act-5/act-3 model
JM Welker, V Serobyan, E Zaker Esfahani… - PLoS …, 2023 - journals.plos.org
Genetic robustness can be achieved via several mechanisms including transcriptional
adaptation (TA), a sequence similarity-driven process whereby mutant mRNA degradation …
adaptation (TA), a sequence similarity-driven process whereby mutant mRNA degradation …
The Gene Sculpt Suite: a set of tools for genome editing
CM Mann, G Martínez-Gálvez, JM Welker… - Nucleic acids …, 2019 - academic.oup.com
The discovery and development of DNA-editing nucleases (Zinc Finger Nucleases, TALENs,
CRISPR/Cas systems) has given scientists the ability to precisely engineer or edit genomes …
CRISPR/Cas systems) has given scientists the ability to precisely engineer or edit genomes …