User profiles for Juan Nogales
Juan NogalesResearch Scientist at CSIC Verified email at cnb.csic.es Cited by 3440 |
Detailing the optimality of photosynthesis in cyanobacteria through systems biology analysis
J Nogales, S Gudmundsson… - Proceedings of the …, 2012 - National Acad Sciences
Photosynthesis has recently gained considerable attention for its potential role in the
development of renewable energy sources. Optimizing photosynthetic organisms for biomass or …
development of renewable energy sources. Optimizing photosynthetic organisms for biomass or …
MEMOTE for standardized genome-scale metabolic model testing
To the Editor—Reconstructing metabolic reaction networks enables the development of
testable hypotheses of an organism’s metabolism under different conditions 1. State-of-the-art …
testable hypotheses of an organism’s metabolism under different conditions 1. State-of-the-art …
[HTML][HTML] A genome-scale metabolic reconstruction of Pseudomonas putida KT2440: i JN746 as a cell factory
Background Pseudomonas putida is the best studied pollutant degradative bacteria and is
harnessed by industrial biotechnology to synthesize fine chemicals. Since the publication of P…
harnessed by industrial biotechnology to synthesize fine chemicals. Since the publication of P…
Optimizing genome-scale network reconstructions
… Juan Nogales … Jonathan Monk and Juan Nogales: These authors contributed equally
to this work. … Juan Nogales …
to this work. … Juan Nogales …
Aerobic degradation of aromatic compounds
Our view on the bacterial responses to the aerobic degradation of aromatic compounds has
been enriched considerably by the current omic methodologies and systems biology …
been enriched considerably by the current omic methodologies and systems biology …
SEVA 4.0: an update of the Standard European Vector Architecture database for advanced analysis and programming of bacterial phenotypes
The SEVA platform ( https://seva-plasmids.com ) was launched one decade ago, both as a
database (DB) and as a physical repository of plasmid vectors for genetic analysis and …
database (DB) and as a physical repository of plasmid vectors for genetic analysis and …
High‐quality genome‐scale metabolic modelling of Pseudomonas putida highlights its broad metabolic capabilities
Genome‐scale reconstructions of metabolism are computational species‐specific knowledge
bases able to compute systemic metabolic properties. We present a comprehensive and …
bases able to compute systemic metabolic properties. We present a comprehensive and …
[HTML][HTML] The metabolic potential of plastics as biotechnological carbon sources–review and targets for the future
The plastic crisis requires drastic measures, especially for the plastics’ end-of-life. Mixed
plastic fractions are currently difficult to recycle, but microbial metabolism might open new …
plastic fractions are currently difficult to recycle, but microbial metabolism might open new …
[HTML][HTML] Characterizing acetogenic metabolism using a genome-scale metabolic reconstruction of Clostridium ljungdahlii
Background The metabolic capabilities of acetogens to ferment a wide range of sugars, to
grow autotrophically on H 2 /CO 2 , and more importantly on synthesis gas (H 2 /CO/CO 2 ) …
grow autotrophically on H 2 /CO 2 , and more importantly on synthesis gas (H 2 /CO/CO 2 ) …
Growth phase‐dependent expression of the Pseudomonas putida KT2440 transcriptional machinery analysed with a genome‐wide DNA microarray
Bacterial transcriptional networks are built on a hierarchy of regulators, on top of which lie the
components of the RNA polymerase (in particular the sigma factors) and the global control …
components of the RNA polymerase (in particular the sigma factors) and the global control …