User profiles for Julian Venegas

Julian Venegas

PhD Candidate - Computational Math, Science & Engineering, Michigan State University
Verified email at msu.edu
Cited by 35

Deep learning in single-cell analysis

…, W Tang, Z Li, H Wen, Y Wang, J Venegas… - ACM Transactions on …, 2022 - dl.acm.org
Single-cell technologies are revolutionizing the entire field of biology. The large volumes of
data generated by single-cell technologies are high-dimensional, sparse, heterogeneous, …

Dance: A deep learning library and benchmark for single-cell analysis

J Ding, H Wen, W Tang, R Liu, Z Li, J Venegas, R Su… - bioRxiv, 2022 - biorxiv.org
In the realm of single-cell analysis, computational approaches have brought an increasing
number of fantastic prospects for innovation and invention. Meanwhile, it also presents …

Composite modeling of leaf shape along shoots discriminates Vitis species better than individual leaves

…, KE Smith, SJ Teresi, J Venegas… - Applications in plant …, 2020 - Wiley Online Library
Premise Leaf morphology is dynamic, continuously deforming during leaf expansion and
among leaves within a shoot. Here, we measured the leaf morphology of more than 200 …

[HTML][HTML] DANCE: A deep learning library and benchmark platform for single-cell analysis

…, H Wen, W Tang, Z Li, J Venegas… - Genome …, 2024 - genomebiology.biomedcentral.com
DANCE is the first standard, generic, and extensible benchmark platform for accessing and
evaluating computational methods across the spectrum of benchmark datasets for numerous …

[HTML][HTML] Changes in salivary biomarkers associated with periodontitis and diabetic neuropathy in individuals with type 1 diabetes

…, J Reiss, A Cornett, J Sugai, J Venegas… - Scientific Reports, 2022 - nature.com
The objective of this pilot clinical study was to identify salivary biomarkers that are associated
with periodontal disease and measures of diabetic autonomic dysfunction. Saliva samples …

SpatialCTD: a large-scale TME spatial transcriptomic dataset to evaluate cell type deconvolution for immuno-oncology

J Ding, J Venegas, Q Lu, Y Wang, L Wu, W Jin, H Wen… - bioRxiv, 2023 - biorxiv.org
Recent technological advancements have enabled spatially resolved transcriptomic profiling
but at multi-cellular resolution. The task of cell type deconvolution has been introduced to …

[HTML][HTML] Effect of inoculation with Acaulospora and Glomus on the growth and nutrition of blueberries (Vaccinium corymbosum) with different fertilization levels

G Roveda-Hoyos, JF Venegas-Gómez… - … de Ciencias Hortícolas, 2022 - scielo.org.co
In recent years, the global demand for blueberries has been growing because of its nutraceutical
properties in the fruits, which provide important benefits to human health. Colombia, …

Composite modeling of leaf shape across shoots discriminates Vitis species better than individual leaves

…, RZ Shrote, KE Smith, SJ Teresi, J Venegas… - bioRxiv, 2020 - biorxiv.org
Premise of study Leaf morphology is dynamic, continuously deforming during leaf expansion
and among leaves within a shoot. We measured leaf morphology from over 200 vines over …

Insights into process reliability through simulation

V Agaram, J Venegas - 2015 Annual Reliability and …, 2015 - ieeexplore.ieee.org
Julian Venegas is a senior in mathematics and computer science at Oakland University.
He is specializing in discrete event simulation and modeling, as well as, in the application of …

Simulation Based Process Reliability Design

V Agaram, J Venegas - 2015 - sae.org
System dynamics modeling of complex processes such as product development, manufacturing,
and service, is an efficient approach for assessing value potential of different business …