User profiles for Jungjoon K. Lee
Jungjoon K. LeeAssistant Professor, Biochemistry/SynCTI, National University of Singapore Verified email at nus.edu.sg Cited by 998 |
[HTML][HTML] Directed evolution of CRISPR-Cas9 to increase its specificity
…, E Jeong, J Lee, M Jung, E Shin, Y Kim, K Lee… - Nature …, 2018 - nature.com
The use of CRISPR-Cas9 as a therapeutic reagent is hampered by its off-target effects.
Although rationally designed S. pyogenes Cas9 (SpCas9) variants that display higher …
Although rationally designed S. pyogenes Cas9 (SpCas9) variants that display higher …
[HTML][HTML] Sniper2L is a high-fidelity Cas9 variant with high activity
Although several high-fidelity SpCas9 variants have been reported, it has been observed
that this increased specificity is associated with reduced on-target activity, limiting the …
that this increased specificity is associated with reduced on-target activity, limiting the …
[HTML][HTML] TAPE-seq is a cell-based method for predicting genome-wide off-target effects of prime editor
J Kwon, M Kim, S Bae, A Jo, Y Kim, JK Lee - Nature Communications, 2022 - nature.com
Prime editors (PEs) are powerful tools that widen the possibilities for sequence modifications
during genome editing. Although methods based on the analysis of Cas9 nuclease or …
during genome editing. Although methods based on the analysis of Cas9 nuclease or …
Synthesis and stability of small molecule probes for Pseudomonas aeruginosa quorum sensing modulation
FG Glansdorp, GL Thomas, JK Lee… - Organic & …, 2004 - pubs.rsc.org
The human pathogen Pseudomonas aeruginosa uses N-butyryl-L-homoserine lactone (BHL)
and N-(3-oxododecanyl)-L-homoserine lactone (OdDHL) as small molecule intercellular …
and N-(3-oxododecanyl)-L-homoserine lactone (OdDHL) as small molecule intercellular …
Single molecule analysis of effects of non-canonical guide RNAs and specificity-enhancing mutations on Cas9-induced DNA unwinding
…, H Wang, J Mallon, S Bailey, JK Lee… - Nucleic acids …, 2019 - academic.oup.com
Cas9 has made a wide range of genomic manipulation possible. However, its specificity
continues to be a challenge. Non-canonical gRNAs and new engineered variants of Cas9 have …
continues to be a challenge. Non-canonical gRNAs and new engineered variants of Cas9 have …
[HTML][HTML] Extru-seq: a method for predicting genome-wide Cas9 off-target sites with advantages of both cell-based and in vitro approaches
We present a novel genome-wide off-target prediction method named Extru-seq and
compare it with cell-based (GUIDE-seq), in vitro (Digenome-seq), and in silico methods using …
compare it with cell-based (GUIDE-seq), in vitro (Digenome-seq), and in silico methods using …
Using Sniper-Cas9 to minimize off-target effects of CRISPR-Cas9 without the loss of on-target activity via directed evolution
J Lee, M Jung, E Jeong, JK Lee - JoVE (Journal of Visualized Experiments), 2019 - jove.com
The development of clustered regularly interspaced short palindromic repeats (CRISPR)-associated
protein 9 (Cas9) into therapeutic modalities requires the avoidance of its potentially …
protein 9 (Cas9) into therapeutic modalities requires the avoidance of its potentially …
Functional identification of ligands for a catalytic metal ion in group I introns
Many enzymes use metal ions within their active sites to achieve enormous rate acceleration.
Understanding how metal ions mediate catalysis requires elucidation of metal ion …
Understanding how metal ions mediate catalysis requires elucidation of metal ion …
[HTML][HTML] Pharmacological properties of ginsenoside Re
…, C Xu, ZA Yan, A Wang, YF Su, JJ Lee… - Frontiers in …, 2022 - frontiersin.org
Ginsenoside Re is a protopanaxatriol-type saponin extracted from the berry, leaf, stem, flower
bud, and root of Panax ginseng. In recent years, ginsenoside Re (Re) has been attracting …
bud, and root of Panax ginseng. In recent years, ginsenoside Re (Re) has been attracting …
Assessing the Predictive Ability of Computational Epitope Prediction Methods on Fel d 1 Allergen
Purpose: Though computational epitope prediction methods have been widely used, there
have been only limited studies conducted in the context of allergies. Our research aims to …
have been only limited studies conducted in the context of allergies. Our research aims to …