The NCBI dbGaP database of genotypes and phenotypes

…, K Tryka, R Bagoutdinov, L Hao, A Kiang, J Paschall… - Nature …, 2007 - nature.com
The National Center for Biotechnology Information has created the dbGaP public repository
for individual-level phenotype, exposure, genotype and sequence data and the associations …

Common genetic variation in the HLA region is associated with late-onset sporadic Parkinson's disease

…, D Yearout, DM Kay, KF Doheny, J Paschall… - Nature …, 2010 - nature.com
Parkinson's disease is a common disorder that leads to motor and cognitive disability. We
performed a genome-wide association study of 2,000 individuals with Parkinson's disease (…

Quality control and quality assurance in genotypic data for genome‐wide association studies

…, C McHugh, I Painter, J Paschall… - Genetic …, 2010 - Wiley Online Library
Genome‐wide scans of nucleotide variation in human subjects are providing an increasing
number of replicated associations with complex disease traits. Most of the variants detected …

[HTML][HTML] An evidence-based approach to establish the functional and clinical significance of copy number variants in intellectual and developmental disabilities

EB Kaminsky, V Kaul, J Paschall, DM Church… - Genetics in …, 2011 - nature.com
Purpose: Copy number variants have emerged as a major cause of human disease such as
autism and intellectual disabilities. Because copy number variants are common in normal …

The Matchmaker Exchange: a platform for rare disease gene discovery

…, JB Krier, A Misyura, CJ Mungall, J Paschall… - Human …, 2015 - Wiley Online Library
There are few better examples of the need for data sharing than in the rare disease community,
where patients, physicians, and researchers must search for “the needle in a haystack” to …

Quality control procedures for genome‐wide association studies

…, AN McDavid, DB Mirel, JE Paschall… - Current protocols in …, 2011 - Wiley Online Library
Genome‐wide association studies (GWAS) are being conducted at an unprecedented rate
in population‐based cohorts and have increased our understanding of the pathophysiology …

Open Targets: a platform for therapeutic target identification and validation

…, H Parkinson, B Palka, J Paschall… - Nucleic acids …, 2017 - academic.oup.com
We have designed and developed a data integration and visualization platform that provides
evidence about the association of known and potential drug targets with diseases. The …

[PDF][PDF] International cooperation to enable the diagnosis of all rare genetic diseases

…, G Matthijs, A Olry, S Parker, J Paschall… - The American Journal of …, 2017 - cell.com
Provision of a molecularly confirmed diagnosis in a timely manner for children and adults with
rare genetic diseases shortens their "diagnostic odyssey," improves disease management, …

[HTML][HTML] The European Genome-phenome Archive of human data consented for biomedical research

…, M Alberich, S de la Torre, A Navarro, J Paschall… - Nature …, 2015 - nature.com
The European Genome-phenome Archive (EGA) is a permanent archive that promotes the
distribution and sharing of genetic and phenotypic data consented for specific approved uses …

DbVar and DGVa: public archives for genomic structural variation

…, M Maguire, M Corbett, G Zhou, J Paschall… - Nucleic acids …, 2012 - academic.oup.com
Much has changed in the last two years at DGVa ( http://www.ebi.ac.uk/dgva ) and dbVar (
http://www.ncbi.nlm.nih.gov/dbvar ). We are now processing direct submissions rather than …