Involvement of the nuclear cap-binding protein complex in alternative splicing in Arabidopsis thaliana
KD Raczynska, CG Simpson, A Ciesiolka… - Nucleic Acids …, 2010 - academic.oup.com
The nuclear cap-binding protein complex (CBC) participates in 5′ splice site selection of
introns that are proximal to the mRNA cap. However, it is not known whether CBC has a role in …
introns that are proximal to the mRNA cap. However, it is not known whether CBC has a role in …
The SERRATE protein is involved in alternative splicing in Arabidopsis thaliana
KD Raczynska, A Stepien, D Kierzkowski… - Nucleic acids …, 2013 - academic.oup.com
How alternative splicing (AS) is regulated in plants has not yet been elucidated. Previously,
we have shown that the nuclear cap-binding protein complex (AtCBC) is involved in AS in …
we have shown that the nuclear cap-binding protein complex (AtCBC) is involved in AS in …
U7 snRNA: A tool for gene therapy
A Gadgil, KD Raczyńska - The Journal of Gene Medicine, 2021 - Wiley Online Library
Most U‐rich small nuclear ribonucleoproteins (snRNPs) are complexes that mediate the
splicing of pre‐mRNAs. U7 snRNP is an exception in that it is not involved in splicing but is a …
splicing of pre‐mRNAs. U7 snRNP is an exception in that it is not involved in splicing but is a …
FUS/TLS contributes to replication-dependent histone gene expression by interaction with U7 snRNPs and histone-specific transcription factors
KD Raczynska, MD Ruepp, A Brzek… - Nucleic acids …, 2015 - academic.oup.com
Replication-dependent histone genes are up-regulated during the G1/S phase transition to
meet the requirement for histones to package the newly synthesized DNA. In mammalian …
meet the requirement for histones to package the newly synthesized DNA. In mammalian …
[HTML][HTML] Context-dependent regulation of gene expression by non-canonical small RNAs
K Plawgo, KD Raczynska - Non-coding RNA, 2022 - mdpi.com
In recent functional genomics studies, a large number of non-coding RNAs have been identified.
It has become increasingly apparent that noncoding RNAs are crucial players in a wide …
It has become increasingly apparent that noncoding RNAs are crucial players in a wide …
[HTML][HTML] Plant mitochondrial genes can be expressed from mRNAs lacking stop codons
The mRNAs of the nad6 and ccmC genes of Arabidopsis and cauliflower were found to be
processed upstream of the inframe stop codons. This result was confirmed by northern …
processed upstream of the inframe stop codons. This result was confirmed by northern …
[HTML][HTML] Long intergenic noncoding RNAs affect biological pathways underlying autoimmune and neurodegenerative disorders
P Plewka, KD Raczynska - Molecular Neurobiology, 2022 - Springer
Long intergenic noncoding RNAs (lincRNAs) are a class of independently transcribed
molecules longer than 200 nucleotides that do not overlap known protein-coding genes. …
molecules longer than 200 nucleotides that do not overlap known protein-coding genes. …
[HTML][HTML] ALS-linked FUS mutants affect the localization of U7 snRNP and replication-dependent histone gene expression in human cells
…, AL Nishimura, CE Shaw, MD Ruepp, KD Raczyńska - Scientific reports, 2021 - nature.com
Genes encoding replication-dependent histones lack introns, and the mRNAs produced are
a unique class of RNA polymerase II transcripts in eukaryotic cells that do not end in a …
a unique class of RNA polymerase II transcripts in eukaryotic cells that do not end in a …
[HTML][HTML] Role of long intergenic noncoding RNAs in cancers with an overview of microRNA binding
R Pasieka, G Zasoński, KD Raczyńska - Molecular diagnosis & therapy, 2023 - Springer
Long intergenic noncoding RNAs are transcripts originating from the regions without annotated
coding genes. They are located mainly in the nucleus and regulate gene expression. …
coding genes. They are located mainly in the nucleus and regulate gene expression. …
Regulation of plant gene expression by alternative splicing
CG Simpson, S Manthri, KD Raczynska… - Biochemical Society …, 2010 - portlandpress.com
AS (alternative splicing) is a post-transcriptional process which regulates gene expression
through increasing protein complexity and modulating mRNA transcript levels. Regulation of …
through increasing protein complexity and modulating mRNA transcript levels. Regulation of …