User profiles for Katherine Louie
Katherine LouieLawrence Berkeley Lab Verified email at lbl.gov Cited by 3055 |
Dynamic root exudate chemistry and microbial substrate preferences drive patterns in rhizosphere microbial community assembly
Like all higher organisms, plants have evolved in the context of a microbial world, shaping
both their evolution and their contemporary ecology. Interactions between plant roots and soil …
both their evolution and their contemporary ecology. Interactions between plant roots and soil …
Widespread adenine N6-methylation of active genes in fungi
N6-methyldeoxyadenine (6mA) is a noncanonical DNA base modification present at low levels
in plant and animal genomes 1 , 2 , 3 , 4 , but its prevalence and association with genome …
in plant and animal genomes 1 , 2 , 3 , 4 , but its prevalence and association with genome …
Cooking shapes the structure and function of the gut microbiome
Diet is a critical determinant of variation in gut microbial structure and function, outweighing
even host genetics 1 , 2 – 3 . Numerous microbiome studies have compared diets with …
even host genetics 1 , 2 – 3 . Numerous microbiome studies have compared diets with …
[HTML][HTML] GNPS Dashboard: collaborative exploration of mass spectrometry data in the web browser
To the Editor—The importance of providing open and transparent solutions to use, share,
inspect and reproduce mass spectrometry (MS) data analysis is becoming more apparent. To …
inspect and reproduce mass spectrometry (MS) data analysis is becoming more apparent. To …
CRAGE enables rapid activation of biosynthetic gene clusters in undomesticated bacteria
It is generally believed that exchange of secondary metabolite biosynthetic gene clusters (BGCs)
among closely related bacteria is an important driver of BGC evolution and …
among closely related bacteria is an important driver of BGC evolution and …
Lineage-specific chromatin signatures reveal a regulator of lipid metabolism in microalgae
Alga-derived lipids represent an attractive potential source of biofuels. However, lipid
accumulation in algae is a stress response tightly coupled to growth arrest, thereby imposing a …
accumulation in algae is a stress response tightly coupled to growth arrest, thereby imposing a …
Regulation of Oxygenic Photosynthesis during Trophic Transitions in the Green Alga Chromochloris zofingiensis
Light and nutrients are critical regulators of photosynthesis and metabolism in plants and
algae. Many algae have the metabolic flexibility to grow photoautotrophically, heterotrophically, …
algae. Many algae have the metabolic flexibility to grow photoautotrophically, heterotrophically, …
Substrate availability and not thermal acclimation controls microbial temperature sensitivity response to long‐term warming
Microbes are responsible for cycling carbon (C) through soils, and predicted changes in soil
C stocks under climate change are highly sensitive to shifts in the mechanisms assumed to …
C stocks under climate change are highly sensitive to shifts in the mechanisms assumed to …
OpenMSI: a high-performance web-based platform for mass spectrometry imaging
Mass spectrometry imaging (MSI) enables researchers to directly probe endogenous
molecules directly within the architecture of the biological matrix. Unfortunately, efficient access, …
molecules directly within the architecture of the biological matrix. Unfortunately, efficient access, …
Novel metabolic interactions and environmental conditions mediate the boreal peatmoss-cyanobacteria mutualism
Interactions between Sphagnum (peat moss) and cyanobacteria play critical roles in terrestrial
carbon and nitrogen cycling processes. Knowledge of the metabolites exchanged, the …
carbon and nitrogen cycling processes. Knowledge of the metabolites exchanged, the …