User profiles for Kathryn S Lilley

kathryn lilley

Professor of Cellular Dynamics
Verified email at cam.ac.uk
Cited by 31149

A subcellular map of the human proteome

…, C Gnann, S Hober, M Hjelmare, F Johansson, S Lee… - Science, 2017 - science.org
INTRODUCTION A complete view of human biology can only be achieved by studying the
molecular components of its smallest functional unit, the cell. Cells are internally organized …

DIA-NN: neural networks and interference correction enable deep proteome coverage in high throughput

V Demichev, CB Messner, SI Vernardis, KS Lilley… - Nature …, 2020 - nature.com
We present an easy-to-use integrated software suite, DIA-NN, that exploits deep neural
networks and new quantification and signal correction strategies for the processing of data-…

The minimum information about a proteomics experiment (MIAPE)

CF Taylor, NW Paton, KS Lilley, PA Binz… - Nature …, 2007 - nature.com
Both the generation and the analysis of proteomics data are now widespread, and high-throughput
approaches are commonplace. Protocols continue to increase in complexity as …

[PDF][PDF] Ultra-high-throughput clinical proteomics reveals classifiers of COVID-19 infection

…, DJ Porteous, RE Marioni, C Langenberg, KS Lilley… - Cell systems, 2020 - cell.com
The COVID-19 pandemic is an unprecedented global challenge, and point-of-care
diagnostic classifiers are urgently required. Here, we present a platform for ultra-high-throughput …

The phage abortive infection system, ToxIN, functions as a protein–RNA toxin–antitoxin pair

…, IJ Foulds, DP Humphreys, KS Lilley… - Proceedings of the …, 2009 - National Acad Sciences
Various mechanisms exist that enable bacteria to resist bacteriophage infection. Resistance
strategies include the abortive infection (Abi) systems, which promote cell death and limit …

Mapping the Arabidopsis organelle proteome

…, RB Watson, P Dupree, KS Lilley - Proceedings of the …, 2006 - National Acad Sciences
A challenging task in the study of the secretory pathway is the identification and localization
of new proteins to increase our understanding of the functions of different organelles. …

[HTML][HTML] Circadian orchestration of the hepatic proteome

…, JS O'Neill, GKY Wong, J Chesham, M Odell, KS Lilley… - Current Biology, 2006 - cell.com
Circadian rhythms are essential to health. Their disruption is associated with metabolic diseases
in experimental animals and man [1–3]. Local metabolic rhythms represent an output of …

[HTML][HTML] Addressing accuracy and precision issues in iTRAQ quantitation

…, PG Sadowski, PD Charles, SV Hester, KS Lilley - Molecular & Cellular …, 2010 - ASBMB
iTRAQ (isobaric tags for relative or absolute quantitation) is a mass spectrometry technology
that allows quantitative comparison of protein abundance by measuring peak intensities of …

Analysis of detergent-resistant membranes in Arabidopsis. Evidence for plasma membrane lipid rafts

…, A MacAskill, JA Napier, MH Beale, KS Lilley… - Plant …, 2005 - academic.oup.com
The trafficking and function of cell surface proteins in eukaryotic cells may require association
with detergent-resistant sphingolipid- and sterol-rich membrane domains. The aim of this …

[HTML][HTML] dia-PASEF data analysis using FragPipe and DIA-NN for deep proteomics of low sample amounts

…, J Decker, S Kaspar-Schoenefeld, KS Lilley… - Nature …, 2022 - nature.com
The dia-PASEF technology uses ion mobility separation to reduce signal interferences and
increase sensitivity in proteomic experiments. Here we present a two-dimensional peak-…