User profiles for Kaustubh Amritkar
 | Kaustubh AmritkarPhD Candidate, University of Wisconsin Madison Verified email at wisc.edu Cited by 30 |
[HTML][HTML] Predicting and designing therapeutics against the Nipah virus
Despite Nipah virus outbreaks having high mortality rates (>70% in Southeast Asia), there
are no licensed drugs against it. In this study, we have considered all 9 Nipah proteins as …
are no licensed drugs against it. In this study, we have considered all 9 Nipah proteins as …
[HTML][HTML] Evolutionary flexibility and rigidity in the bacterial methylerythritol phosphate (MEP) pathway
Terpenoids are a diverse class of compounds with wide-ranging uses including as industrial
solvents, pharmaceuticals, and fragrances. Efforts to produce terpenoids sustainably by …
solvents, pharmaceuticals, and fragrances. Efforts to produce terpenoids sustainably by …
Methods for molecular modelling of protein complexes
Biological processes are often mediated by complexes formed between proteins and various
biomolecules. The 3D structures of such protein–biomolecule complexes provide insights …
biomolecules. The 3D structures of such protein–biomolecule complexes provide insights …
Assessing, predicting and designing peptide ligands for proteins
K Amritkar - 2020 - dr.iiserpune.ac.in
Up to 40% of the protein interactions in a cell are mediated by peptides and protein-peptide
interactions play a vital role in a cell’s functioning. Peptide-mediated protein interactions …
interactions play a vital role in a cell’s functioning. Peptide-mediated protein interactions …
Biophysical models for studying patterns of RuBisCO small subunit evolution
KM Amritkar, B Cuevas-Zuviría, B Kaçar - Biophysical Journal, 2023 - cell.com
For much of Earth's history, key enzymes have dominated the conversion of energy into the
production of biomass. This history extends hundreds of millions of years into the past, but …
production of biomass. This history extends hundreds of millions of years into the past, but …
Predicting and designing therapeutics against the Nipah virus
K AMRITKAR, MS MADHUSUDHAN, N SEN, N SONI… - 2019 - dr.iiserpune.ac.in
Despite Nipah virus outbreaks having high mortality rates (>70% in Southeast Asia), there
are no licensed drugs against it. In this study, we have considered all 9 Nipah proteins as …
are no licensed drugs against it. In this study, we have considered all 9 Nipah proteins as …
[PDF][PDF] see Lakshmi P Anantha 167 Akbar M Ali see Alam Md Nur 317 Alam Md Nur Exact travelling wave solutions of the (3+ 1)-
RE Amritkar, J Antony, M Avila, A Krishna… - ias.ac.in
Pandey BP Elastic constants and Debye temperature of wz-AlN and wz-GaN semiconductors
under high pressure from first-principles 413 Pandey R see Bhattacharya S 673 Panigrahi …
under high pressure from first-principles 413 Pandey R see Bhattacharya S 673 Panigrahi …
Biophysics-based protein language models for protein engineering
… Kaustubh Amritkar for collecting and processing PDB files for METL-Global. The research
was performed using the computing resources and assistance of the University of Wisconsin-…
was performed using the computing resources and assistance of the University of Wisconsin-…
Computational prediction of SUMOylation sites in proteins
Y Ramtirtha - 2022 - dr.iiserpune.ac.in
… Samarpita, Devatrisha, Ashwin and Kaustubh did their summer and winter projects with
me. It was fun to work with them. There were many rotation students whose names I could not …
me. It was fun to work with them. There were many rotation students whose names I could not …
Computational approaches to predict protein functional families and functional sites
Understanding the mechanisms of protein function is indispensable for many biological
applications, such as protein engineering and drug design. However, experimental annotations …
applications, such as protein engineering and drug design. However, experimental annotations …